(data stored in ACNUC7421 zone)

SWISSPROT: Q5LWU4_RUEPO

ID   Q5LWU4_RUEPO            Unreviewed;       189 AA.
AC   Q5LWU4;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 77.
DE   SubName: Full=DNA binding protein, putative {ECO:0000313|EMBL:AAV93469.1};
GN   OrderedLocusNames=SPO0141 {ECO:0000313|EMBL:AAV93469.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93469.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93469.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93469.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93469.1; -; Genomic_DNA.
DR   RefSeq; WP_011045912.1; NC_003911.12.
DR   STRING; 246200.SPO0141; -.
DR   EnsemblBacteria; AAV93469; AAV93469; SPO0141.
DR   KEGG; sil:SPO0141; -.
DR   eggNOG; ENOG4108UTH; Bacteria.
DR   eggNOG; ENOG4111GGV; LUCA.
DR   HOGENOM; HOG000263462; -.
DR   OMA; TLDTIWR; -.
DR   OrthoDB; 1069752at2; -.
DR   BioCyc; RPOM246200:G1G48-144-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR013096; Cupin_2.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR011051; RmlC_Cupin_sf.
DR   Pfam; PF07883; Cupin_2; 1.
DR   Pfam; PF01381; HTH_3; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   SUPFAM; SSF51182; SSF51182; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
DR   PRODOM; Q5LWU4.
DR   SWISS-2DPAGE; Q5LWU4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT   DOMAIN       16     70       HTH cro/C1-type. {ECO:0000259|PROSITE:
FT                                PS50943}.
SQ   SEQUENCE   189 AA;  19985 MW;  06F8A03CF5749813 CRC64;
     MTENSDDILN RLPARLKEAR RAQGLSLEAV ANLSGVSRSM VSQIERGESS PTIATLWNLT
     RALQVDFAGL LEAAEAADRI DTLRASEVPS IDNMGQGCRI RILSPPEDAG GHEVYDISFK
     PGGTLNSQPH ARGTREQLTV LDGAVRVTSG AAAQDLGPGD TARYAADIPH KISASGDGPA
     RVFLIVKTA
//

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