(data stored in ACNUC7421 zone)

SWISSPROT: Q5LWE9_RUEPO

ID   Q5LWE9_RUEPO            Unreviewed;       270 AA.
AC   Q5LWE9;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 67.
DE   SubName: Full=Rhomboid family protein {ECO:0000313|EMBL:AAV93711.1};
GN   OrderedLocusNames=SPO0393 {ECO:0000313|EMBL:AAV93711.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93711.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93711.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93711.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
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DR   EMBL; CP000031; AAV93711.1; -; Genomic_DNA.
DR   STRING; 246200.SPO0393; -.
DR   EnsemblBacteria; AAV93711; AAV93711; SPO0393.
DR   KEGG; sil:SPO0393; -.
DR   eggNOG; ENOG4108R54; Bacteria.
DR   eggNOG; ENOG4111FGD; LUCA.
DR   HOGENOM; HOG000145876; -.
DR   OMA; LAMGKMV; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
DR   Gene3D; 1.20.1540.10; -; 1.
DR   InterPro; IPR022764; Peptidase_S54_rhomboid_dom.
DR   InterPro; IPR035952; Rhomboid-like_sf.
DR   Pfam; PF01694; Rhomboid; 1.
PE   4: Predicted;
DR   PRODOM; Q5LWE9.
DR   SWISS-2DPAGE; Q5LWE9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     55     75       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     87    108       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    123    143       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    155    175       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    181    201       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    213    236       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    242    261       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      116    257       Rhomboid. {ECO:0000259|Pfam:PF01694}.
SQ   SEQUENCE   270 AA;  28890 MW;  D57A7E1B32B30656 CRC64;
     MPENTRGVNW VSVMMGNSRL ENSVPVAYPW GKGTSTAAKG PPMSSDNDTS PVNPLPPVVV
     ALVLFIMGIE ITFSLGARGI VGGPQAVGWR LAAMQSYAFS PDILTWMWET GRWPVEHVIR
     LVSYPFVSVS FTQSLFVCVF VLAMGKMVAE SFGSLAMLVV FLVSGIGGAL GYALLTGSPV
     ALIGGFPPVY GLIGAFTWLL WRKLSLVGQH QARAFSLIAF LMGAQLLFGL LFGGGLDWVA
     DLAGFATGFA LSFLLSPGGW ARMRGRIRHD
//

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