(data stored in ACNUC7421 zone)

SWISSPROT: Q5LWC8_RUEPO

ID   Q5LWC8_RUEPO            Unreviewed;       671 AA.
AC   Q5LWC8;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 84.
DE   SubName: Full=Peptidyl-dipeptidase, putative {ECO:0000313|EMBL:AAV93732.1};
GN   OrderedLocusNames=SPO0414 {ECO:0000313|EMBL:AAV93732.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93732.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93732.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93732.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|RuleBase:RU003435};
CC       Note=Binds 1 zinc ion. {ECO:0000256|RuleBase:RU003435};
CC   -!- SIMILARITY: Belongs to the peptidase M3 family.
CC       {ECO:0000256|RuleBase:RU003435}.
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DR   EMBL; CP000031; AAV93732.1; -; Genomic_DNA.
DR   RefSeq; WP_011046175.1; NC_003911.12.
DR   STRING; 246200.SPO0414; -.
DR   MEROPS; M03.005; -.
DR   EnsemblBacteria; AAV93732; AAV93732; SPO0414.
DR   KEGG; sil:SPO0414; -.
DR   eggNOG; ENOG4105DGW; Bacteria.
DR   eggNOG; COG0339; LUCA.
DR   HOGENOM; HOG000245984; -.
DR   KO; K01284; -.
DR   OMA; KRSGAWC; -.
DR   OrthoDB; 1935578at2; -.
DR   BioCyc; RPOM246200:G1G48-421-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   CDD; cd06456; M3A_DCP; 1.
DR   Gene3D; 1.10.1370.10; -; 1.
DR   InterPro; IPR034005; M3A_DCP.
DR   InterPro; IPR024077; Neurolysin/TOP_dom2.
DR   InterPro; IPR001567; Pept_M3A_M3B.
DR   Pfam; PF01432; Peptidase_M3; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LWC8.
DR   SWISS-2DPAGE; Q5LWC8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Hydrolase {ECO:0000256|RuleBase:RU003435};
KW   Metal-binding {ECO:0000256|RuleBase:RU003435};
KW   Metalloprotease {ECO:0000256|RuleBase:RU003435};
KW   Protease {ECO:0000256|RuleBase:RU003435};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Zinc {ECO:0000256|RuleBase:RU003435}.
FT   DOMAIN      226    667       Peptidase_M3. {ECO:0000259|Pfam:PF01432}.
SQ   SEQUENCE   671 AA;  73775 MW;  A1A1C848790E9962 CRC64;
     MTNPILADWQ TPFDIAPFDR IADSDFAPAL EVALAEHRAE IAAIADSPEA PTFANVIEAL
     EAAGGALDRV LGVFFTVAGA DSNPAREELQ RAFSPQLAAH FSEISANKAL FARVAAVWEA
     RADLELSDEQ QRVLMLTHRG FVRAGAALSG EAEARMKEIK ARLAVLGTEF TQNLLADERD
     WFMDLSEDDL EGLPDFVTAA ARAAGQEKEA AGPVVTLSRS LIVPFLQFSP RRDLRERAYR
     AWVARGANGG KTDNRAIATE TLTLRQERAA LLGYDSFAAY KLETEMARSP DRVRDLLMQV
     WAPARARAEA DAEVLTAMMQ EDGINGPLEP WDWHYYAARR RKAEHDLDEA ALKPYLQLDR
     MIEASFACAN RLFGLEFRPL DIALYHPDCR AWEVTRDGRH VAVFIGDYFA RGSKRSGAWC
     SAMRAQAKFP RTQAPVVINV CNFAKGDPAL LSYDDARTLF HEFGHALHQM LSDVTYESVS
     GTSVARDFVE LPSQLYEHWL EVPEVLAEFA THAETGAPMP AEMLEKVLGA ANFDQGFQTV
     EYVASALVDL AFHDGPAPSD PMAKQAEVLA ELGMPHAIGM RHATPHFAHV FAGDGYSSGY
     YSYMWSEVMD ADAFAAFEEA GGAFDPDRAE ALERHILSTG GSRDAEDLYL AFRGRLPGVE
     ALLKGRGLIA A
//

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