(data stored in ACNUC7421 zone)

SWISSPROT: RL2_RUEPO

ID   RL2_RUEPO               Reviewed;         280 AA.
AC   Q5LW59;
DT   30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 85.
DE   RecName: Full=50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320};
GN   Name=rplB {ECO:0000255|HAMAP-Rule:MF_01320};
GN   OrderedLocusNames=SPO0484;
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3;
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C.,
RA   Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A.,
RA   Rahe E., Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., DeBoy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3;
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- FUNCTION: One of the primary rRNA binding proteins. Required for
CC       association of the 30S and 50S subunits to form the 70S ribosome,
CC       for tRNA binding and peptide bond formation. It has been suggested
CC       to have peptidyltransferase activity; this is somewhat
CC       controversial. Makes several contacts with the 16S rRNA in the 70S
CC       ribosome. {ECO:0000255|HAMAP-Rule:MF_01320}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms a bridge to the
CC       30S subunit in the 70S ribosome. {ECO:0000255|HAMAP-
CC       Rule:MF_01320}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL2 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01320}.
DR   EMBL; CP000031; AAV93801.1; -; Genomic_DNA.
DR   RefSeq; WP_011046244.1; NC_003911.12.
DR   SMR; Q5LW59; -.
DR   STRING; 246200.SPO0484; -.
DR   EnsemblBacteria; AAV93801; AAV93801; SPO0484.
DR   KEGG; sil:SPO0484; -.
DR   eggNOG; ENOG4105CFD; Bacteria.
DR   eggNOG; COG0090; LUCA.
DR   HOGENOM; HOG000232982; -.
DR   KO; K02886; -.
DR   OMA; HGYIKGV; -.
DR   OrthoDB; 961486at2; -.
DR   BioCyc; RPOM246200:G1G48-490-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 2.30.30.30; -; 1.
DR   Gene3D; 4.10.950.10; -; 1.
DR   HAMAP; MF_01320_B; Ribosomal_L2_B; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR022666; Rbsml_prot_L2_RNA-bd_dom.
DR   InterPro; IPR014722; Rib_L2_dom2.
DR   InterPro; IPR002171; Ribosomal_L2.
DR   InterPro; IPR005880; Ribosomal_L2_bac/org-type.
DR   InterPro; IPR022669; Ribosomal_L2_C.
DR   InterPro; IPR022671; Ribosomal_L2_CS.
DR   InterPro; IPR014726; Ribosomal_L2_dom3.
DR   InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR   PANTHER; PTHR13691; PTHR13691; 1.
DR   Pfam; PF00181; Ribosomal_L2; 1.
DR   Pfam; PF03947; Ribosomal_L2_C; 1.
DR   PIRSF; PIRSF002158; Ribosomal_L2; 1.
DR   SMART; SM01383; Ribosomal_L2; 1.
DR   SMART; SM01382; Ribosomal_L2_C; 1.
DR   SUPFAM; SSF50104; SSF50104; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR01171; rplB_bact; 1.
DR   PROSITE; PS00467; RIBOSOMAL_L2; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LW59.
DR   SWISS-2DPAGE; Q5LW59.
KW   Complete proteome; Reference proteome; Ribonucleoprotein;
KW   Ribosomal protein; RNA-binding; rRNA-binding.
FT   CHAIN         1    280       50S ribosomal protein L2.
FT                                /FTId=PRO_0000237243.
SQ   SEQUENCE   280 AA;  30505 MW;  252672B0C4306492 CRC64;
     MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLTKS GGRNNTGRIT SRRRGGGAKR
     LYRIVDFKRN KFDVAATVER IEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDKVVASA
     KADIKPGNAM PFSGMPIGTI VHNIEMKPGK GGQIARAAGT YAQFVGRDGG YAQIRLSSGE
     LRMVRQECMA TVGAVSNPDN SNQNYGKAGR MRHKGIRPSV RGVAMNPIDH PHGGGEGRTS
     GGRTPVTPWG KDTKGTRTRN KNKASQKLII RSRHAKKKGR
//

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