SWISSPROT: Q5LVY5_RUEPO

ID   Q5LVY5_RUEPO            Unreviewed;       342 AA.
AC   Q5LVY5;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   16-JAN-2019, entry version 81.
DE   SubName: Full=Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:AAV93875.1};
GN   OrderedLocusNames=SPO0559 {ECO:0000313|EMBL:AAV93875.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV93875.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV93875.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV93875.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -!- SUBCELLULAR LOCATION: Cell membrane
CC       {ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein
CC       {ECO:0000256|RuleBase:RU363032}.
CC   -!- SIMILARITY: Belongs to the binding-protein-dependent transport
CC       system permease family. {ECO:0000256|RuleBase:RU363032}.
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DR   EMBL; CP000031; AAV93875.1; -; Genomic_DNA.
DR   RefSeq; WP_011046316.1; NC_003911.12.
DR   STRING; 246200.SPO0559; -.
DR   EnsemblBacteria; AAV93875; AAV93875; SPO0559.
DR   KEGG; sil:SPO0559; -.
DR   eggNOG; ENOG4107R3P; Bacteria.
DR   eggNOG; COG0601; LUCA.
DR   HOGENOM; HOG000170243; -.
DR   KO; K02033; -.
DR   OMA; ILMYFAN; -.
DR   OrthoDB; 1479518at2; -.
DR   BioCyc; RPOM246200:G1G48-566-MONOMER; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0042626; F:ATPase activity, coupled to transmembrane movement of substances; ISS:TIGR.
DR   GO; GO:0035673; F:oligopeptide transmembrane transporter activity; ISS:TIGR.
DR   GO; GO:0006857; P:oligopeptide transport; ISS:TIGR.
DR   CDD; cd06261; TM_PBP2; 1.
DR   Gene3D; 1.10.3720.10; -; 1.
DR   InterPro; IPR000515; MetI-like.
DR   InterPro; IPR035906; MetI-like_sf.
DR   Pfam; PF00528; BPD_transp_1; 1.
DR   SUPFAM; SSF161098; SSF161098; 1.
DR   PROSITE; PS50928; ABC_TM1; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q5LVY5.
DR   SWISS-2DPAGE; Q5LVY5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819239};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819262};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU363032,
KW   ECO:0000256|SAAS:SAAS00819286};
KW   Transport {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM      7     29       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    112    139       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    151    171       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    201    221       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   TRANSMEM    304    331       Helical. {ECO:0000256|RuleBase:RU363032}.
FT   DOMAIN      112    328       ABC transmembrane type-1.
FT                                {ECO:0000259|PROSITE:PS50928}.
SQ   SEQUENCE   342 AA;  37450 MW;  CEBA0061D7DABF45 CRC64;
     MAILRYAFYR FGTMLMTLLV VSVLVFAIIN LPPGDYLSNQ IAELKASGQS AGVAKAEFLR
     KEYALDRPVW QQYMIWMGFM PGPHGFSGLI QGNFGWSFEF DRPVSEIVGD SLWLTVLVNM
     AAIVFVYATA LPLGVIAAAK ARTWADYTSA FVGYLGLATP NFLLALILYY YGRKYLDIPI
     GGLMDPAFEG QPMSWAKIQS VLVHLIVPTI VIGTAGASAM MQRLRANMLD ELGKPYVETA
     IAKGMAPSRM LAKYPLRVAF NPFVADIGNL LPSMVSGSVL VSVVMGLQTI GPTLLTALKS
     QDMFLSGFVL MFVALLTLIG TMISDILLVM LDPRIRYEGR DA
//