(data stored in ACNUC7421 zone)

SWISSPROT: Q5LVS3_RUEPO

ID   Q5LVS3_RUEPO            Unreviewed;       182 AA.
AC   Q5LVS3;
DT   01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT   01-FEB-2005, sequence version 1.
DT   08-MAY-2019, entry version 67.
DE   SubName: Full=Cytochrome c oxidase domain protein {ECO:0000313|EMBL:AAV97112.1};
GN   OrderedLocusNames=SPO0623 {ECO:0000313|EMBL:AAV97112.1};
OS   Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
OS   (Silicibacter pomeroyi).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Ruegeria.
OX   NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV97112.1, ECO:0000313|Proteomes:UP000001023};
RN   [1] {ECO:0000313|EMBL:AAV97112.1, ECO:0000313|Proteomes:UP000001023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=15602564; DOI=10.1038/nature03170;
RA   Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA   Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA   Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E.,
RA   Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A.,
RA   Paulsen I.T., Ren Q., Daugherty S.C., Deboy R.T., Dodson R.J.,
RA   Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J.,
RA   Haft D.H., Selengut J., Ward N.;
RT   "Genome sequence of Silicibacter pomeroyi reveals adaptations to the
RT   marine environment.";
RL   Nature 432:910-913(2004).
RN   [2] {ECO:0000313|EMBL:AAV97112.1, ECO:0000313|Proteomes:UP000001023}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC   {ECO:0000313|Proteomes:UP000001023};
RX   PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA   Rivers A.R., Smith C.B., Moran M.A.;
RT   "An updated genome annotation for the model marine bacterium Ruegeria
RT   pomeroyi DSS-3.";
RL   Stand. Genomic Sci. 9:11-11(2014).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000031; AAV97112.1; -; Genomic_DNA.
DR   STRING; 246200.SPO0623; -.
DR   EnsemblBacteria; AAV97112; AAV97112; SPO0623.
DR   KEGG; sil:SPO0623; -.
DR   Proteomes; UP000001023; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:InterPro.
DR   Gene3D; 1.20.210.10; -; 1.
DR   InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
DR   InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
DR   SUPFAM; SSF81442; SSF81442; 1.
DR   PROSITE; PS50855; COX1; 1.
PE   4: Predicted;
DR   PRODOM; Q5LVS3.
DR   SWISS-2DPAGE; Q5LVS3.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001023};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001023};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     28     51       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     72     90       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    105    128       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    140    168       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN        1    182       COX1. {ECO:0000259|PROSITE:PS50855}.
SQ   SEQUENCE   182 AA;  20246 MW;  B4783A918CCC1F54 CRC64;
     MVQSIFFLFC LILAPLVAHL RQWSPTALFA VATLVYAAFG GANFVSTQIV LSNIRETEPA
     YRDTYYVVNR GYVSLNLGLA MAVFAVLTWL QTRFGAMLYP KITKALFWLL HLGLIGGSAF
     STMLVFLLPK PRRFIDYPEF METFILVGSW ATLISSIAVL GLLGLLVWSS ALTWLASRNS
     GH
//

If you have problems or comments...

PBIL Back to PBIL home page