(data stored in SCRATCH zone)

SWISSPROT: YQGF_PSEU2

ID   YQGF_PSEU2              Reviewed;         146 AA.
AC   Q4ZZ68;
DT   31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT   07-JUN-2005, sequence version 1.
DT   11-DEC-2019, entry version 87.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN   OrderedLocusNames=Psyr_0484;
OS   Pseudomonas syringae pv. syringae (strain B728a).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX   NCBI_TaxID=205918;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=B728a;
RX   PubMed=16043691; DOI=10.1073/pnas.0504930102;
RA   Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A.,
RA   Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S.,
RA   Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M.,
RA   Kyrpides N.C., Ivanova N., Lindow S.E.;
RT   "Comparison of the complete genome sequences of Pseudomonas syringae pv.
RT   syringae B728a and pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005).
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
DR   EMBL; CP000075; AAY35554.1; -; Genomic_DNA.
DR   RefSeq; WP_002551734.1; NC_007005.1.
DR   RefSeq; YP_233592.1; NC_007005.1.
DR   SMR; Q4ZZ68; -.
DR   STRING; 205918.Psyr_0484; -.
DR   EnsemblBacteria; AAY35554; AAY35554; Psyr_0484.
DR   GeneID; 3365960; -.
DR   KEGG; psb:Psyr_0484; -.
DR   PATRIC; fig|205918.7.peg.503; -.
DR   eggNOG; ENOG4107Y66; Bacteria.
DR   eggNOG; COG0816; LUCA.
DR   HOGENOM; HOG000016954; -.
DR   KO; K07447; -.
DR   OMA; DERMSTV; -.
DR   BioCyc; PSYR205918:G1G4J-485-MONOMER; -.
DR   Proteomes; UP000000426; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q4ZZ68.
DR   SWISS-2DPAGE; Q4ZZ68.
KW   Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT   CHAIN           1..146
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_0000257568"
SQ   SEQUENCE   146 AA;  15933 MW;  D081BAAE0999A024 CRC64;
     MAALRLLLGI DYGTKQIGVA VGQAITGQAR ELCTLKAQNG VPDWDKVQAL INEWKPDAIV
     VGLPLNMDGT PSDMSARAEK FSRKLNGRFG VTVYTHDERL TTFEAKGERM ARGGQKGSYR
     DNPVDAIAAA LLLQGWLDEH PELLNV
//

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