(data stored in ACNUC7421 zone)

SWISSPROT: Q47TE2_THEFY

ID   Q47TE2_THEFY            Unreviewed;       127 AA.
AC   Q47TE2;
DT   13-SEP-2005, integrated into UniProtKB/TrEMBL.
DT   13-SEP-2005, sequence version 1.
DT   08-MAY-2019, entry version 99.
DE   SubName: Full=Cold-shock DNA-binding protein family {ECO:0000313|EMBL:AAZ54272.1};
GN   OrderedLocusNames=Tfu_0234 {ECO:0000313|EMBL:AAZ54272.1};
OS   Thermobifida fusca (strain YX).
OC   Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae;
OC   Thermobifida.
OX   NCBI_TaxID=269800 {ECO:0000313|EMBL:AAZ54272.1, ECO:0000313|Proteomes:UP000000434};
RN   [1] {ECO:0000313|Proteomes:UP000000434}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YX {ECO:0000313|Proteomes:UP000000434};
RX   PubMed=17209016; DOI=10.1128/JB.01899-06;
RA   Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M.,
RA   DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A.,
RA   Richardson P., Wilson D.B., Kyrpides N.;
RT   "Genome sequence and analysis of the soil cellulolytic actinomycete
RT   Thermobifida fusca YX.";
RL   J. Bacteriol. 189:2477-2486(2007).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000088; AAZ54272.1; -; Genomic_DNA.
DR   RefSeq; WP_011290681.1; NC_007333.1.
DR   STRING; 269800.Tfu_0234; -.
DR   EnsemblBacteria; AAZ54272; AAZ54272; Tfu_0234.
DR   KEGG; tfu:Tfu_0234; -.
DR   eggNOG; ENOG41090GJ; Bacteria.
DR   eggNOG; COG1278; LUCA.
DR   HOGENOM; HOG000070675; -.
DR   KO; K03704; -.
DR   OMA; QRVEFGM; -.
DR   OrthoDB; 2034748at2; -.
DR   BioCyc; TFUS269800:G1G4Q-239-MONOMER; -.
DR   Proteomes; UP000000434; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd04458; CSP_CDS; 1.
DR   InterPro; IPR011129; CSD.
DR   InterPro; IPR019844; CSD_1.
DR   InterPro; IPR002059; CSP_DNA-bd.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF00313; CSD; 1.
DR   PRINTS; PR00050; COLDSHOCK.
DR   SMART; SM00357; CSP; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS00352; CSD_1; 1.
PE   4: Predicted;
DR   PRODOM; Q47TE2.
DR   SWISS-2DPAGE; Q47TE2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000434};
KW   DNA-binding {ECO:0000313|EMBL:AAZ54272.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000434}.
FT   DOMAIN       15     33       CSD_1. {ECO:0000259|PROSITE:PS00352}.
SQ   SEQUENCE   127 AA;  14104 MW;  84EC478F59C0995F CRC64;
     MPTGKVKWYD AGKGFGFLTK DDGGEVFLHA SALPPGTTTL RPGQRVEFGI VEGRKGTQAL
     QVRLLDTPPS VAKALRKKPD EMVVIIEDLI KLLDNVSNTY RRNKYPDRRE ATKIAKVLRA
     LADDIEL
//

If you have problems or comments...

PBIL Back to PBIL home page