(data stored in ACNUC7421 zone)

SWISSPROT: Q47SI1_THEFY

ID   Q47SI1_THEFY            Unreviewed;       256 AA.
AC   Q47SI1;
DT   13-SEP-2005, integrated into UniProtKB/TrEMBL.
DT   13-SEP-2005, sequence version 1.
DT   08-MAY-2019, entry version 94.
DE   SubName: Full=RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AAZ54586.1};
GN   OrderedLocusNames=Tfu_0548 {ECO:0000313|EMBL:AAZ54586.1};
OS   Thermobifida fusca (strain YX).
OC   Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae;
OC   Thermobifida.
OX   NCBI_TaxID=269800 {ECO:0000313|EMBL:AAZ54586.1, ECO:0000313|Proteomes:UP000000434};
RN   [1] {ECO:0000313|Proteomes:UP000000434}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YX {ECO:0000313|Proteomes:UP000000434};
RX   PubMed=17209016; DOI=10.1128/JB.01899-06;
RA   Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M.,
RA   DiBartolo G., Martinez M., Lapidus A., Lucas S., Copeland A.,
RA   Richardson P., Wilson D.B., Kyrpides N.;
RT   "Genome sequence and analysis of the soil cellulolytic actinomycete
RT   Thermobifida fusca YX.";
RL   J. Bacteriol. 189:2477-2486(2007).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
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DR   EMBL; CP000088; AAZ54586.1; -; Genomic_DNA.
DR   STRING; 269800.Tfu_0548; -.
DR   EnsemblBacteria; AAZ54586; AAZ54586; Tfu_0548.
DR   KEGG; tfu:Tfu_0548; -.
DR   eggNOG; ENOG4105EMN; Bacteria.
DR   eggNOG; COG1595; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   KO; K03088; -.
DR   OMA; TYINLYR; -.
DR   Proteomes; UP000000434; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014293; RNA_pol_sigma70_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02947; SigH_actino; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q47SI1.
DR   SWISS-2DPAGE; Q47SI1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000434};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000434};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       69    132       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      174    224       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   256 AA;  28866 MW;  B5D257147C186C25 CRC64;
     MPASVGTLLR ERSVTATGMA RVRFEPLQPY GEVAVATGEN RARRPTGLSQ SQETIEDRAA
     RFERDAMPLL DQLYSAALRM TRNPTDAEDL VQETFTKAFG SFHQFKEGTN LKAWLYRILT
     NTFINSYRKK QREPRQAGTE DIEDWQLARA ASHTSSGLKS AEAEALEHLP DTDVKRALQE
     LPEDFRIAVY LVDVEGFAYK EAAEIMDTPI GTVMSRLHRG RRQLRSLLEE YALERGFLSV
     AERESVGAVN GGKDQR
//

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