(data stored in ACNUC7421 zone)

SWISSPROT: Q2IMH5_ANADE

ID   Q2IMH5_ANADE            Unreviewed;       202 AA.
AC   Q2IMH5;
DT   07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT   07-MAR-2006, sequence version 1.
DT   08-MAY-2019, entry version 83.
DE   SubName: Full=RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABC80007.1};
GN   OrderedLocusNames=Adeh_0230 {ECO:0000313|EMBL:ABC80007.1};
OS   Anaeromyxobacter dehalogenans (strain 2CP-C).
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
OC   Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
OX   NCBI_TaxID=290397 {ECO:0000313|EMBL:ABC80007.1, ECO:0000313|Proteomes:UP000001935};
RN   [1] {ECO:0000313|Proteomes:UP000001935}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=2CP-C {ECO:0000313|Proteomes:UP000001935};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA   Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C.,
RA   Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M.,
RA   Kyrpides N., Anderson I., Sanford R.A., Ritalahti K.M., Thomas H.S.,
RA   Kirby J.R., Zhulin I.B., Loeffler F.E., Richardson P.;
RT   "Complete sequence of Anaeromyxobacter dehalogenans 2CP-C.";
RL   Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS01160068}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000251; ABC80007.1; -; Genomic_DNA.
DR   RefSeq; WP_011419290.1; NC_007760.1.
DR   STRING; 290397.Adeh_0230; -.
DR   EnsemblBacteria; ABC80007; ABC80007; Adeh_0230.
DR   KEGG; ade:Adeh_0230; -.
DR   eggNOG; ENOG4105NK8; Bacteria.
DR   eggNOG; ENOG410XT41; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   KO; K03088; -.
DR   OMA; VKSRMRY; -.
DR   BioCyc; ADEH290397:G1G5W-237-MONOMER; -.
DR   Proteomes; UP000001935; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR43133; PTHR43133; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q2IMH5.
DR   SWISS-2DPAGE; Q2IMH5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001935};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001935};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       24     88       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      126    176       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   202 AA;  22381 MW;  498B41D69DB64681 CRC64;
     MPDESDERLM LRFRDGDARA FEALVRRHRT PIFSFLLRLT RDRGRAEDLC QEAFLRVVKA
     SGAWEPRARF RTWLYAMARN LAVDESRRMA FRRASSLEAD PAASALAADG PAPDRAADAA
     LVRPLLEAAL AALPDEQREV FLLREHAGLR FPEIAEVTGA PEPTVKSRMR YALEALRERL
     AAMGVEPDSP AGAPASTRSA AP
//

If you have problems or comments...

PBIL Back to PBIL home page