(data stored in ACNUC7421 zone)

SWISSPROT: Q147C4_PARXL

ID   Q147C4_PARXL            Unreviewed;       467 AA.
AC   Q147C4;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   08-MAY-2019, entry version 89.
DE   SubName: Full=ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:ABE28565.1};
DE            EC=5.99.1.- {ECO:0000313|EMBL:ABE28565.1};
GN   ORFNames=Bxe_A4436 {ECO:0000313|EMBL:ABE28565.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE28565.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE28565.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE28565.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC       {ECO:0000256|RuleBase:RU000492}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000270; ABE28565.1; -; Genomic_DNA.
DR   RefSeq; WP_011486423.1; NZ_CP008760.1.
DR   STRING; 266265.Bxe_A4436; -.
DR   EnsemblBacteria; ABE28565; ABE28565; Bxe_A4436.
DR   GeneID; 4005659; -.
DR   KEGG; bxb:DR64_2111; -.
DR   KEGG; bxe:Bxe_A4436; -.
DR   PATRIC; fig|266265.5.peg.29; -.
DR   eggNOG; ENOG4105C1J; Bacteria.
DR   eggNOG; COG0513; LUCA.
DR   HOGENOM; HOG000268809; -.
DR   KO; K05591; -.
DR   OMA; FGCQALV; -.
DR   OrthoDB; 626183at2; -.
DR   BioCyc; BXEN266265:BXE_RS00130-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR   Pfam; PF03880; DbpA; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51195; Q_MOTIF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q147C4.
DR   SWISS-2DPAGE; Q147C4.
KW   ATP-binding {ECO:0000256|RuleBase:RU000492};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   Helicase {ECO:0000256|RuleBase:RU000492, ECO:0000313|EMBL:ABE28565.1};
KW   Hydrolase {ECO:0000256|RuleBase:RU000492};
KW   Isomerase {ECO:0000313|EMBL:ABE28565.1};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU000492};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817}.
FT   DOMAIN        9     37       Q_MOTIF. {ECO:0000259|PROSITE:PS51195}.
FT   DOMAIN       40    211       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      221    386       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
FT   COILED       86    106       {ECO:0000256|SAM:Coils}.
FT   MOTIF         9     37       Q motif. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00552}.
SQ   SEQUENCE   467 AA;  51195 MW;  FFF35FF9D1240655 CRC64;
     MNSPHTAGAP FSQLSLPPAT LANLTQLGYV EMTPIQAASL PIALAGHDLI AQAKTGSGKT
     AAFSLALLAR LDVRNFAVQA MVLCPTRELA DQVTQEIRRL ARAEENIKVL TLCGGTPMRP
     QTASLEHGAH IVVGTPGRIM DHLERGSLPL QSLNTLVLDE ADRMLDMGFF DDIATVVKQC
     PKERQTLLFS ATYPEGIVKL SQQFLRNPKE VKLAERHDNT KIRQRFYEVT EDERLHAVGL
     LLNHYRPVST LAFCNTKQQC RDLLDVLRAQ GFHALALHGE LDQRERDQVL IQFANRSCSV
     LVATDVAARG LDIAQLEAVI NVDVTPDPEV HVHRIGRTGR ADQEGWALSL ASMNEMGRVG
     SLEQAQKRDV EWHKLSELTA TSNEPLLPPM ETLQILGGRK EKIRPGDVLG ALTGEAGFAG
     SQIGKINVTE MSTYVAVERS VAREAVRKLS AGKVKGKKVK VRLMDDA
//

If you have problems or comments...

PBIL Back to PBIL home page