(data stored in SCRATCH zone)

SWISSPROT: Q13SE4_PARXL

ID   Q13SE4_PARXL            Unreviewed;       241 AA.
AC   Q13SE4;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   08-MAY-2019, entry version 87.
DE   SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABE32995.1};
GN   ORFNames=Bxe_B3002 {ECO:0000313|EMBL:ABE32995.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE32995.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE32995.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE32995.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE32995.1; -; Genomic_DNA.
DR   RefSeq; WP_011490384.1; NZ_CP008762.1.
DR   STRING; 266265.Bxe_B3002; -.
DR   EnsemblBacteria; ABE32995; ABE32995; Bxe_B3002.
DR   GeneID; 4006847; -.
DR   KEGG; bxb:DR64_5331; -.
DR   KEGG; bxe:Bxe_B3002; -.
DR   PATRIC; fig|266265.5.peg.4687; -.
DR   eggNOG; ENOG4108U6C; Bacteria.
DR   eggNOG; ENOG4111G47; LUCA.
DR   HOGENOM; HOG000273990; -.
DR   OMA; DNHELYI; -.
DR   OrthoDB; 1911275at2; -.
DR   BioCyc; BXEN266265:BXE_RS22220-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd07377; WHTH_GntR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.20.120.530; -; 1.
DR   InterPro; IPR011711; GntR_C.
DR   InterPro; IPR008920; TF_FadR/GntR_C.
DR   InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF07729; FCD; 1.
DR   Pfam; PF00392; GntR; 1.
DR   PRINTS; PR00035; HTHGNTR.
DR   SMART; SM00895; FCD; 1.
DR   SMART; SM00345; HTH_GNTR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF48008; SSF48008; 1.
DR   PROSITE; PS50949; HTH_GNTR; 1.
PE   4: Predicted;
DR   PRODOM; Q13SE4.
DR   SWISS-2DPAGE; Q13SE4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|SAAS:SAAS01113652};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|SAAS:SAAS01113624};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS01113681}.
FT   DOMAIN       22     89       HTH gntR-type. {ECO:0000259|PROSITE:
FT                                PS50949}.
SQ   SEQUENCE   241 AA;  27018 MW;  7C3504B93ECDE9F6 CRC64;
     MQNSGFEAGV APSPLMPKVE RQRLHDTVVE HIRRFIVEGA LEAGKKLNER ELCETLGISR
     TPLREALKVL AAEGLIEISP NRGASVSKMS EAELRETFEL MSGIEAFSGE LAAERMTAAE
     LSEIKALHYA MLACRTQNDL PGYYSRNQAI HDKINEAARN SALRQTYMAV NRRLQALRFR
     SNFQVPKWDR AIHDHDEMLK ALEARDGKKL SAILRQHLLD KRDAVLQVQS QEAAAASTLK
     T
//

If you have problems or comments...

PBIL Back to PBIL home page