(data stored in SCRATCH zone)

SWISSPROT: Q13RX3_PARXL

ID   Q13RX3_PARXL            Unreviewed;       102 AA.
AC   Q13RX3;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   08-MAY-2019, entry version 89.
DE   RecName: Full=Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337};
DE            EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337};
DE   AltName: Full=Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337};
DE            Short=Exonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337};
GN   Name=xseB {ECO:0000256|HAMAP-Rule:MF_00337};
GN   ORFNames=Bxe_B2829 {ECO:0000313|EMBL:ABE33166.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33166.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33166.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33166.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -!- FUNCTION: Bidirectionally degrades single-stranded DNA into large
CC       acid-insoluble oligonucleotides, which are then degraded further
CC       into small acid-soluble oligonucleotides. {ECO:0000256|HAMAP-
CC       Rule:MF_00337, ECO:0000256|SAAS:SAAS00198688}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Exonucleolytic cleavage in either 5'- to 3'- or 3'- to
CC         5'-direction to yield nucleoside 5'-phosphates.; EC=3.1.11.6;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00337,
CC         ECO:0000256|SAAS:SAAS01115318};
CC   -!- SUBUNIT: Heterooligomer composed of large and small subunits.
CC       {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198687}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00337,
CC       ECO:0000256|SAAS:SAAS00198693}.
CC   -!- SIMILARITY: Belongs to the XseB family. {ECO:0000256|HAMAP-
CC       Rule:MF_00337, ECO:0000256|SAAS:SAAS00573442}.
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DR   EMBL; CP000271; ABE33166.1; -; Genomic_DNA.
DR   RefSeq; WP_007178839.1; NZ_CP008762.1.
DR   SMR; Q13RX3; -.
DR   STRING; 266265.Bxe_B2829; -.
DR   EnsemblBacteria; ABE33166; ABE33166; Bxe_B2829.
DR   GeneID; 4006572; -.
DR   KEGG; bxb:DR64_5158; -.
DR   KEGG; bxe:Bxe_B2829; -.
DR   eggNOG; ENOG41082UU; Bacteria.
DR   eggNOG; COG1722; LUCA.
DR   HOGENOM; HOG000228798; -.
DR   KO; K03602; -.
DR   OMA; GDMLKPF; -.
DR   OrthoDB; 2057189at2; -.
DR   BioCyc; BXEN266265:BXE_RS23055-MONOMER; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0009318; C:exodeoxyribonuclease VII complex; IEA:InterPro.
DR   GO; GO:0008855; F:exodeoxyribonuclease VII activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006308; P:DNA catabolic process; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.287.1040; -; 1.
DR   HAMAP; MF_00337; Exonuc_7_S; 1.
DR   InterPro; IPR003761; Exonuc_VII_S.
DR   InterPro; IPR037004; Exonuc_VII_ssu_sf.
DR   PANTHER; PTHR34137; PTHR34137; 1.
DR   Pfam; PF02609; Exonuc_VII_S; 1.
DR   PIRSF; PIRSF006488; Exonuc_VII_S; 1.
DR   ProDom; PD028235; Exonuc_VII_S; 1.
DR   TIGRFAMs; TIGR01280; xseB; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q13RX3.
DR   SWISS-2DPAGE; Q13RX3.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00337,
KW   ECO:0000256|SAAS:SAAS00198692};
KW   Exonuclease {ECO:0000256|HAMAP-Rule:MF_00337,
KW   ECO:0000256|SAAS:SAAS00198691};
KW   Hydrolase {ECO:0000256|HAMAP-Rule:MF_00337,
KW   ECO:0000256|SAAS:SAAS00198690, ECO:0000313|EMBL:ABE33166.1};
KW   Nuclease {ECO:0000256|HAMAP-Rule:MF_00337,
KW   ECO:0000256|SAAS:SAAS00198689};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817}.
FT   COILED       61     81       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   102 AA;  10783 MW;  A0097AF28ACAB11C CRC64;
     MAKTASKDTA ATPAEGVDTT PLPENYEAAQ AELEGLVARM ESGNLSLEES LTAYRRGAAL
     VAFCQQQLEK VEQQVRVLDG ETLKPLPMNT AGTAATESGD DL
//

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