(data stored in ACNUC7421 zone)

SWISSPROT: Q13RF5_PARXL

ID   Q13RF5_PARXL            Unreviewed;       314 AA.
AC   Q13RF5;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   30-AUG-2017, entry version 65.
DE   SubName: Full=Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABE33334.1};
GN   ORFNames=Bxe_B2659 {ECO:0000313|EMBL:ABE33334.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33334.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33334.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33334.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
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DR   EMBL; CP000271; ABE33334.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q13RF5; -.
DR   STRING; 266265.Bxe_B2659; -.
DR   DNASU; 4006625; -.
DR   EnsemblBacteria; ABE33334; ABE33334; Bxe_B2659.
DR   KEGG; bxe:Bxe_B2659; -.
DR   eggNOG; ENOG4107RYN; Bacteria.
DR   eggNOG; COG1737; LUCA.
DR   HOGENOM; HOG000250670; -.
DR   OrthoDB; POG091H0UE9; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd05013; SIS_RpiR; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR000281; HTH_RpiR.
DR   InterPro; IPR035472; RpiR-like_SIS.
DR   InterPro; IPR001347; SIS.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF01418; HTH_6; 1.
DR   Pfam; PF01380; SIS; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS51071; HTH_RPIR; 1.
DR   PROSITE; PS51464; SIS; 1.
PE   4: Predicted;
DR   PRODOM; Q13RF5.
DR   SWISS-2DPAGE; Q13RF5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00390};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00390};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00390}.
FT   DOMAIN       34    110       HTH rpiR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS51071}.
FT   DOMAIN      157    298       SIS. {ECO:0000259|PROSITE:PS51464}.
FT   DNA_BIND     70     89       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00390}.
SQ   SEQUENCE   314 AA;  34409 MW;  B0FC1B5A2C27B509 CRC64;
     MHVRGAHIAP RPAHLLTSIE MAKAQTKQEK RAPQSIESRI AECYDELSEI DQRLADVILS
     APGQLAMQTA TELAATAQVS KATTTRFFQK LGYASYDDAR AIARAAQVGG SPLYLQDRGR
     KNASTKLDDV IQAHLQHEVE NLASTYRSLD TRVLSEVVEA VAHARRVVII GYRHSHTVAT
     MIRRELIQVR SDVVLLPAPG DTLGEYLGDL SAKDVAIVVG LRRRVPAVGL AATALAEAGV
     PIVYMSDVIA GKPARLARWV IRCHTDGLML FDSNVGMTAV VNLICSLVAE RLLERGTNHL
     QRVEILHESL REFE
//

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