(data stored in ACNUC7421 zone)

SWISSPROT: Q13RC2_PARXL

ID   Q13RC2_PARXL            Unreviewed;       591 AA.
AC   Q13RC2;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 63.
DE   SubName: Full=Periplasmic sensor diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:ABE33367.1};
GN   ORFNames=Bxe_B2626 {ECO:0000313|EMBL:ABE33367.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33367.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33367.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33367.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33367.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q13RC2; -.
DR   STRING; 266265.Bxe_B2626; -.
DR   EnsemblBacteria; ABE33367; ABE33367; Bxe_B2626.
DR   KEGG; bxb:DR64_4959; -.
DR   KEGG; bxe:Bxe_B2626; -.
DR   eggNOG; ENOG4105BZU; Bacteria.
DR   eggNOG; ENOG410XNMH; LUCA.
DR   HOGENOM; HOG000225616; -.
DR   OMA; MIEIDIT; -.
DR   OrthoDB; POG091H049G; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0004871; F:signal transducer activity; IEA:InterPro.
DR   CDD; cd01949; GGDEF; 1.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR003660; HAMP_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   Pfam; PF00990; GGDEF; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00304; HAMP; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50885; HAMP; 1.
PE   4: Predicted;
DR   PRODOM; Q13RC2.
DR   SWISS-2DPAGE; Q13RC2.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    323    348       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      350    403       HAMP. {ECO:0000259|PROSITE:PS50885}.
FT   DOMAIN      449    584       GGDEF. {ECO:0000259|PROSITE:PS50887}.
FT   COILED      394    421       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   591 AA;  65165 MW;  2496ACA7B2FC53A7 CRC64;
     MIRKAFSAMS IDRRFGISVA AALLPVLLLC GRLVVHEWHA YMVADDALYA FQTYRAGLLA
     IESVSAERGP TNSVLGENLP IPEARRASLL RARGESDARI EKLLEMLQSS RCPGCATELA
     RIENARAELT GARANVDQLI GLPLAQRRER ALSSAVDRMI KVIPQFSPVI DALAANVVRG
     DTRALNCLIL ATLTADLREA AGQLGSHFTA ALTARRALGE GDQLAIERTE GRIDQLRELI
     DSHIRDRSML ESAPFDRMNR QYFGEGMAYI TDVRSLATRP GGVAISPAQL ADHYVPMMRP
     ITAFRDQVLD LADTEIRFHR SNALGLLAVS ALAAFLLIMI LLSMAMLFRR RVIRPLVDAT
     HVIGAIANGD LTAEIPAARY RGEIKAMFNA IGVLKANSVE RQQLERERGR LIQELKATAE
     TDFLTHLLNR RAFESRARLS CAERNAAEPE LALIMFDIDH FKKINDTYGH ATGDHALQLV
     ARLCRETCRQ ADVVARWGGE EFAVLSRVQD AAQALAVAER LRCRIRETRI PVSGGDGFNI
     TASFGVAFAS ACDSRDVDRL FRRADRLLYQ AKEAGRDRIF ADPTSVASDN A
//

If you have problems or comments...

PBIL Back to PBIL home page