(data stored in ACNUC7421 zone)

SWISSPROT: Q13R07_PARXL

ID   Q13R07_PARXL            Unreviewed;       314 AA.
AC   Q13R07;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 74.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE33482.1};
GN   ORFNames=Bxe_B2509 {ECO:0000313|EMBL:ABE33482.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33482.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33482.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33482.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33482.1; -; Genomic_DNA.
DR   RefSeq; WP_011490850.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13R07; -.
DR   STRING; 266265.Bxe_B2509; -.
DR   PRIDE; Q13R07; -.
DR   EnsemblBacteria; ABE33482; ABE33482; Bxe_B2509.
DR   GeneID; 4006995; -.
DR   KEGG; bxe:Bxe_B2509; -.
DR   PATRIC; fig|266265.5.peg.5197; -.
DR   eggNOG; ENOG4108TK3; Bacteria.
DR   eggNOG; ENOG4111HYJ; LUCA.
DR   HOGENOM; HOG000233514; -.
DR   OMA; AFDELEY; -.
DR   OrthoDB; POG091H04O3; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; Q13R07.
DR   SWISS-2DPAGE; Q13R07.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        4     61       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     21     40       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   314 AA;  34828 MW;  5EC8302523E96557 CRC64;
     MRKISLRHLR CFAAVADTGS FTLAAARLYQ TQSSLTATIQ QFEEEVGLKL FDRTTRRVVM
     TEDAARFKPI ADRVLQDFDT AIGDLKAISL SHRGHVRIAS VPSMIEHVLA PALASFRRAY
     PDITISVSDG SADKVERAVL AGEADFGMAS RLNNFPDLTY LPILGDRFGV LYPDDHPLAK
     IRQPLRWADL SEFEHIALAN DTGIGAFLDS HPALGFHQKA SLHDRASSTN SLFAMLNLGG
     RISVLPELSV LASPLKKFTF RELSEPVITR EVCLITRQLR SFSPNTQRLV DALMENIAED
     YHWDGPRQDQ GKAA
//

If you have problems or comments...

PBIL Back to PBIL home page