(data stored in ACNUC7421 zone)

SWISSPROT: Q13QM9_PARXL

ID   Q13QM9_PARXL            Unreviewed;       304 AA.
AC   Q13QM9;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 79.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABE33610.1};
GN   ORFNames=Bxe_B2379 {ECO:0000313|EMBL:ABE33610.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE33610.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE33610.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE33610.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S.G., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M.,
RA   Lao V., Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A.,
RA   Marx C.J., Parnell J.J., Ramette A., Richardson P., Seeger M.,
RA   Smith D., Spilker T., Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B.,
RA   Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp
RT   genome shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000271; ABE33610.1; -; Genomic_DNA.
DR   RefSeq; WP_011490971.1; NZ_CP008762.1.
DR   ProteinModelPortal; Q13QM9; -.
DR   STRING; 266265.Bxe_B2379; -.
DR   DNASU; 4007125; -.
DR   EnsemblBacteria; ABE33610; ABE33610; Bxe_B2379.
DR   GeneID; 4007125; -.
DR   KEGG; bxb:DR64_4711; -.
DR   KEGG; bxe:Bxe_B2379; -.
DR   PATRIC; fig|266265.5.peg.5330; -.
DR   eggNOG; ENOG4108XGB; Bacteria.
DR   eggNOG; COG2207; LUCA.
DR   HOGENOM; HOG000267929; -.
DR   OMA; CNLSRSY; -.
DR   OrthoDB; POG091H039M; -.
DR   Proteomes; UP000001817; Chromosome 2.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR   Pfam; PF12833; HTH_18; 1.
DR   PRINTS; PR00032; HTHARAC.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; Q13QM9.
DR   SWISS-2DPAGE; Q13QM9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001817};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00593,
KW   ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001817};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00593};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00593}.
FT   DOMAIN      203    301       HTH araC/xylS-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS01124}.
FT   DNA_BIND    220    241       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
FT   DNA_BIND    268    291       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
SQ   SEQUENCE   304 AA;  34016 MW;  E00A8095DF1CDB1E CRC64;
     MFNQTEIAPL TAARKKDSLG CLSNQLHKDI ELEAGDFTFY RKCRRQEKTS EVATPASDRG
     VLIGVSLSAG HRRRIISGNR SAMHEFDKDS VYIRNFEEDY RADLHGAFDF VLVEFSRAFI
     TNTGYERSGS HMTGFSAQPG GKDPIFGHLA QVLALALDRE SQASPLFIEQ LGVTIGTHLV
     DHYGGAPAQS VKPGRRLSSL HETRAKDMLL AKTQDNVSLE EIASACNLSR SYFIRAFRET
     TNRTPHQWLL EQRIERSRHL LRSSDASLSE IAIACGFSDQ SHFTRTFTQL VGTPPGSWRR
     LARS
//

If you have problems or comments...

PBIL Back to PBIL home page