(data stored in ACNUC7421 zone)

SWISSPROT: Q12ZW2_RHOPS

ID   Q12ZW2_RHOPS            Unreviewed;       320 AA.
AC   Q12ZW2;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   10-APR-2019, entry version 52.
DE   SubName: Full=Transposase, IS4 family {ECO:0000313|EMBL:ABE41627.1};
GN   OrderedLocusNames=RPD_0078 {ECO:0000313|EMBL:ABE37318.1}, RPD_0213
GN   {ECO:0000313|EMBL:ABE37453.1}, RPD_0216 {ECO:0000313|EMBL:ABE37456.1},
GN   RPD_0826 {ECO:0000313|EMBL:ABE38064.1}, RPD_4411
GN   {ECO:0000313|EMBL:ABE41627.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE41627.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE41627.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE41627.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000283; ABE37318.1; -; Genomic_DNA.
DR   EMBL; CP000283; ABE37453.1; -; Genomic_DNA.
DR   EMBL; CP000283; ABE37456.1; -; Genomic_DNA.
DR   EMBL; CP000283; ABE38064.1; -; Genomic_DNA.
DR   EMBL; CP000283; ABE41627.1; -; Genomic_DNA.
DR   RefSeq; WP_011500511.1; NC_007958.1.
DR   STRING; 316057.RPD_4411; -.
DR   EnsemblBacteria; ABE37318; ABE37318; RPD_0078.
DR   EnsemblBacteria; ABE37453; ABE37453; RPD_0213.
DR   EnsemblBacteria; ABE37456; ABE37456; RPD_0216.
DR   EnsemblBacteria; ABE38064; ABE38064; RPD_0826.
DR   EnsemblBacteria; ABE41627; ABE41627; RPD_4411.
DR   KEGG; rpd:RPD_0078; -.
DR   KEGG; rpd:RPD_0213; -.
DR   KEGG; rpd:RPD_0216; -.
DR   KEGG; rpd:RPD_0826; -.
DR   KEGG; rpd:RPD_4411; -.
DR   eggNOG; ENOG4105F2I; Bacteria.
DR   eggNOG; COG3039; LUCA.
DR   HOGENOM; HOG000002547; -.
DR   OrthoDB; 568762at2; -.
DR   BioCyc; RPAL316057:RPD_RS00390-MONOMER; -.
DR   BioCyc; RPAL316057:RPD_RS01080-MONOMER; -.
DR   BioCyc; RPAL316057:RPD_RS01095-MONOMER; -.
DR   BioCyc; RPAL316057:RPD_RS04210-MONOMER; -.
DR   BioCyc; RPAL316057:RPD_RS22190-MONOMER; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR   GO; GO:0006313; P:transposition, DNA-mediated; IEA:InterPro.
DR   InterPro; IPR002559; Transposase_11.
DR   InterPro; IPR008490; Transposase_InsH_N.
DR   Pfam; PF01609; DDE_Tnp_1; 1.
DR   Pfam; PF05598; DUF772; 1.
PE   4: Predicted;
DR   PRODOM; Q12ZW2.
DR   SWISS-2DPAGE; Q12ZW2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818}.
FT   DOMAIN       46    120       DUF772. {ECO:0000259|Pfam:PF05598}.
FT   DOMAIN      133    313       DDE_Tnp_1. {ECO:0000259|Pfam:PF01609}.
SQ   SEQUENCE   320 AA;  35991 MW;  3F1FCD4CC53AC11D CRC64;
     MAQDSFIEAL LPAGFGRNER LERISGLIDW DRLAVLIRKV RPGETGRPPY APLAMFKALL
     LQQWYGLSDP GLEEALLDRV SFRRFCGFAL DAQTPDETTL CRFRNALQQA GLGDALFQEV
     LRQLEAAGYV LKTGTLIDAT LVQSSGRTPP SGSTPREVES RSSHDPQADW TRHGAGRRLF
     FGYKAHIAID QGSGLIRARK LTGAKTYESE VADDLVLGDE KAVYADKAYE KRARRQALKA
     RGIKDRIQHR RNKHQKALPR WQAVRNKLIG RVRQAIERTF AQLKGRYGFT RMRYAGITAN
     AFHLDLISIA YNLRTAAAIR
//

If you have problems or comments...

PBIL Back to PBIL home page