(data stored in ACNUC7421 zone)

SWISSPROT: Q13EQ7_RHOPS

ID   Q13EQ7_RHOPS            Unreviewed;       565 AA.
AC   Q13EQ7;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   08-MAY-2019, entry version 65.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   OrderedLocusNames=RPD_0192 {ECO:0000313|EMBL:ABE37432.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE37432.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE37432.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE37432.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the
CC       initiation point. It is needed to translate mRNA with a short
CC       Shine-Dalgarno (SD) purine-rich sequence.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
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DR   EMBL; CP000283; ABE37432.1; -; Genomic_DNA.
DR   RefSeq; WP_011500624.1; NC_007958.1.
DR   STRING; 316057.RPD_0192; -.
DR   EnsemblBacteria; ABE37432; ABE37432; RPD_0192.
DR   KEGG; rpd:RPD_0192; -.
DR   eggNOG; ENOG4105CAV; Bacteria.
DR   eggNOG; COG0539; LUCA.
DR   HOGENOM; HOG000044052; -.
DR   KO; K02945; -.
DR   OMA; SLNEFRY; -.
DR   OrthoDB; 1235756at2; -.
DR   BioCyc; RPAL316057:RPD_RS00975-MONOMER; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
DR   PRODOM; Q13EQ7.
DR   SWISS-2DPAGE; Q13EQ7.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:ABE37432.1};
KW   RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN       30     96       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      114    180       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      201    269       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      286    356       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      373    443       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      454    529       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   COILED       81    101       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   565 AA;  62687 MW;  8071F0D37AA3A054 CRC64;
     MASTDTYNPT RDDFAAMLDE SFAGGNLQES SVIKGIVVAI EKDMAVIDVG LKTEGRVALR
     EFAGPGRESE LKVGDTVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FQGNEKVFGV
     IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMNNS QPFQILKMDR RRGNIVVSRR
     TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
     TEVLTIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARFT GRVTNITDYG
     AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVDVQ VLEVDSVKRR ISLGLKQTMR
     NPWEVFVEKY PVGSTVEGEV KNKTEFGLFL GLDGDVDGMV HLSDLDWKQP GEQVIDNFKK
     GDMVKAVVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA IVTCEVLDVK ESGIDVQIVG
     TDFATFIKRS ELARDRNDQR SDRFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
     AQYGSSDSGA TLGDILGTAL KQRDK
//

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