(data stored in ACNUC7421 zone)

SWISSPROT: Q13DK5_RHOPS

ID   Q13DK5_RHOPS            Unreviewed;       669 AA.
AC   Q13DK5;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   08-MAY-2019, entry version 81.
DE   SubName: Full=Cytochrome-c oxidase {ECO:0000313|EMBL:ABE37834.1};
DE            EC=1.9.3.1 {ECO:0000313|EMBL:ABE37834.1};
GN   OrderedLocusNames=RPD_0596 {ECO:0000313|EMBL:ABE37834.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE37834.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE37834.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE37834.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
CC       {ECO:0000256|RuleBase:RU000370}.
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DR   EMBL; CP000283; ABE37834.1; -; Genomic_DNA.
DR   RefSeq; WP_011501021.1; NC_007958.1.
DR   STRING; 316057.RPD_0596; -.
DR   EnsemblBacteria; ABE37834; ABE37834; RPD_0596.
DR   KEGG; rpd:RPD_0596; -.
DR   eggNOG; ENOG4105BZ9; Bacteria.
DR   eggNOG; COG0843; LUCA.
DR   HOGENOM; HOG000085275; -.
DR   KO; K02298; -.
DR   OMA; FWGKMSF; -.
DR   OrthoDB; 316745at2; -.
DR   BioCyc; RPAL316057:RPD_RS03060-MONOMER; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0070469; C:respirasome; IEA:UniProtKB-KW.
DR   GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0016682; F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; IEA:InterPro.
DR   GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
DR   Gene3D; 1.20.210.10; -; 1.
DR   InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
DR   InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
DR   InterPro; IPR000883; Cyt_C_Oxase_1.
DR   InterPro; IPR023615; Cyt_c_Oxase_su1_BS.
DR   InterPro; IPR014207; Cyt_c_ubiqinol_oxidase_su1.
DR   PANTHER; PTHR10422; PTHR10422; 1.
DR   Pfam; PF00115; COX1; 1.
DR   PRINTS; PR01165; CYCOXIDASEI.
DR   SUPFAM; SSF81442; SSF81442; 1.
DR   TIGRFAMs; TIGR02843; CyoB; 1.
DR   PROSITE; PS50855; COX1; 1.
DR   PROSITE; PS00077; COX1_CUB; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q13DK5.
DR   SWISS-2DPAGE; Q13DK5.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818};
KW   Electron transport {ECO:0000256|RuleBase:RU000370};
KW   Heme {ECO:0000256|RuleBase:RU000370};
KW   Iron {ECO:0000256|RuleBase:RU000370};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|RuleBase:RU000370};
KW   Oxidoreductase {ECO:0000313|EMBL:ABE37834.1};
KW   Respiratory chain {ECO:0000256|RuleBase:RU000370};
KW   Transmembrane {ECO:0000256|RuleBase:RU000370,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU000370}.
FT   TRANSMEM     26     48       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     69     92       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    112    136       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    156    180       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    200    225       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    237    265       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    285    308       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    320    342       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    354    378       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    390    413       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    425    449       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    461    483       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    503    528       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    615    635       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       49    569       COX1. {ECO:0000259|PROSITE:PS50855}.
SQ   SEQUENCE   669 AA;  74977 MW;  710EAF2A10D31809 CRC64;
     MFTNPDIVKA IFGRLSLESL PLHEPIVVLA FIGTALGGAA VAAGITYFKL WGYLWREWFT
     TVDHKRIGIM YMILGIVMLL RGFADAIMMR IQQAMAFNGS EGYLNAHHYD QIFTAHGVIM
     IFFVAMPMVT GLMNYVVPLQ IGARDVSFPF LNNFSFWMTT AGAVLVMISL FVGEFARTGW
     LAYPPLSNIG YSPDVGVDYY IWSLQVAGVG TLLSGVNLIC TIVKLRAPGM TMMRMPIFTW
     TSLCTNILIV ASFPVLTAVL ALLTLDRYVG TNFFTNDFGG NPMMYVNLIW IWGHPEVYIL
     ILPAFGIFSE VAATFSGKRL FGYTSMVYAT VVITILSYLV WLHHFFTMGS GASVNSFFGI
     TTMIISIPTG AKMFNWLFTM YRGRIRYDLP MMWTVAFMLT FVIGGMTGVL LAVPPADFVL
     HNSLFLVAHF HNVIIGGVVF GAFAGIAYWF PKAFGFKLDV FWGKVSFWCW VVGFYFAFMP
     LYVLGLMGVT RRLRVFDDPS YQIWFAIAAF GAFLVLIGIV AFLIQIAVSV MRREQLRDVT
     GDPWNGRTLE WATSSPPPDY NFAFTPMVRD ADAWWDMKKH GYSRPLGGFK PIHMPSNTGT
     GVILAGLSTV MSFGLIWYIW WLAALSFIAL LAVAIGHTFN YHRDYHIPAD EVVRVEDERT
     RLLAAGARP
//

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