(data stored in ACNUC7421 zone)

SWISSPROT: Q0SKK2_RHOJR

ID   Q0SKK2_RHOJR            Unreviewed;       265 AA.
AC   Q0SKK2;
DT   05-SEP-2006, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2006, sequence version 1.
DT   07-JUN-2017, entry version 72.
DE   SubName: Full=Sigma factor, sigma 70 type, group 3 {ECO:0000313|EMBL:ABG91934.1};
GN   OrderedLocusNames=RHA1_ro00098 {ECO:0000313|EMBL:ABG91934.1};
OS   Rhodococcus jostii (strain RHA1).
OC   Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;
OC   Rhodococcus.
OX   NCBI_TaxID=101510 {ECO:0000313|EMBL:ABG91934.1, ECO:0000313|Proteomes:UP000008710};
RN   [1] {ECO:0000313|Proteomes:UP000008710}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RHA1 {ECO:0000313|Proteomes:UP000008710};
RX   PubMed=17030794; DOI=10.1073/pnas.0607048103;
RA   McLeod M.P., Warren R.L., Hsiao W.W.L., Araki N., Myhre M.,
RA   Fernandes C., Miyazawa D., Wong W., Lillquist A.L., Wang D.,
RA   Dosanjh M., Hara H., Petrescu A., Morin R.D., Yang G., Stott J.M.,
RA   Schein J.E., Shin H., Smailus D., Siddiqui A.S., Marra M.A.,
RA   Jones S.J.M., Holt R., Brinkman F.S.L., Miyauchi K., Fukuda M.,
RA   Davies J.E., Mohn W.W., Eltis L.D.;
RT   "The complete genome of Rhodococcus sp. RHA1 provides insights into a
RT   catabolic powerhouse.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15582-15587(2006).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; CP000431; ABG91934.1; -; Genomic_DNA.
DR   RefSeq; WP_011593425.1; NC_008268.1.
DR   STRING; 101510.RHA1_ro00098; -.
DR   PRIDE; Q0SKK2; -.
DR   EnsemblBacteria; ABG91934; ABG91934; RHA1_ro00098.
DR   GeneID; 4219482; -.
DR   KEGG; rha:RHA1_ro00098; -.
DR   PATRIC; fig|101510.16.peg.117; -.
DR   eggNOG; ENOG4105E65; Bacteria.
DR   eggNOG; COG1191; LUCA.
DR   HOGENOM; HOG000270270; -.
DR   KO; K03090; -.
DR   OMA; NEPMEDI; -.
DR   OrthoDB; POG091H09IG; -.
DR   BioCyc; RJOS101510:GJJ1-98-MONOMER; -.
DR   Proteomes; UP000008710; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 2.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02980; SigBFG; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; Q0SKK2.
DR   SWISS-2DPAGE; Q0SKK2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000008710};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008710};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       46    114       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      128    198       Sigma70_r3. {ECO:0000259|Pfam:PF04539}.
FT   DOMAIN      211    259       Sigma70_r4. {ECO:0000259|Pfam:PF04545}.
SQ   SEQUENCE   265 AA;  29315 MW;  695665A1F98F7944 CRC64;
     MSPVSERGER HRPGRDDYKD VAPTVARLRA LDASSGEASA LRDEVITRCL PLADHIARRF
     GGRGEAHEDL LQVARLGLVK AVDRFDPDRG FDFVSYAVPT IMGEVRRYFR DTGWSMRVPR
     RMQELHALIT KAVDELSQEL GRSPSASEIA AQLELDVREV SEGLLAKNAY QTLSMDAAMG
     DDPDDLPLAE TLGEEDPELA NVESHAAVRP ALQKLPPLER RVLMLRFFGS MTQTEIAQRV
     GVSQMQVSRI LARTLSGLRA QLGDG
//

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