(data stored in ACNUC7421 zone)

SWISSPROT: A1AYJ4_PARDP

ID   A1AYJ4_PARDP            Unreviewed;       617 AA.
AC   A1AYJ4;
DT   23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT   23-JAN-2007, sequence version 1.
DT   08-MAY-2019, entry version 93.
DE   SubName: Full=Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABL68338.1};
GN   OrderedLocusNames=Pden_0224 {ECO:0000313|EMBL:ABL68338.1};
OS   Paracoccus denitrificans (strain Pd 1222).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Paracoccus.
OX   NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL68338.1, ECO:0000313|Proteomes:UP000000361};
RN   [1] {ECO:0000313|Proteomes:UP000000361}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R.,
RA   Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Lykidis A., Spiro S., Richardson D.J., Moir J.W.B., Ferguson S.J.,
RA   van Spanning R.J.M., Richardson P.;
RT   "Complete sequence of chromosome 1 of Paracoccus denitrificans
RT   PD1222.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000489; ABL68338.1; -; Genomic_DNA.
DR   STRING; 318586.Pden_0224; -.
DR   PRIDE; A1AYJ4; -.
DR   EnsemblBacteria; ABL68338; ABL68338; Pden_0224.
DR   KEGG; pde:Pden_0224; -.
DR   eggNOG; ENOG4107SZ4; Bacteria.
DR   eggNOG; COG3284; LUCA.
DR   OMA; DEIANSW; -.
DR   BioCyc; PDEN318586:G1GW1-221-MONOMER; -.
DR   Proteomes; UP000000361; Chromosome 1.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008134; F:transcription factor binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF14532; Sigma54_activ_2; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
DR   PRODOM; A1AYJ4.
DR   SWISS-2DPAGE; A1AYJ4.
KW   ATP-binding {ECO:0000256|SAAS:SAAS00473007};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000361};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00814512};
KW   Nucleotide-binding {ECO:0000256|SAAS:SAAS00473126};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000361};
KW   Transcription {ECO:0000256|SAAS:SAAS00814760};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00814754}.
FT   DOMAIN      337    543       Sigma-54 factor interaction.
FT                                {ECO:0000259|PROSITE:PS50045}.
SQ   SEQUENCE   617 AA;  67864 MW;  B5D2867F3CF41FDA CRC64;
     MWETELRGFA DPLSSEISNI LRSRGEADGR LPDVVEQSWK RCLTDYNLLP DAVPKAAVLS
     HSEIQMLMEQ REEFMRIAEP EVERLFRRLV DSEYLVSLAS PQGAMVLFRC DYQYLSELAE
     SGVIPGSIWA EDQQGTNGVG TCLRVGKPVT IAGTEHYGSA IQRLTCLTAP VLGRNGAIDS
     VINVTTARHA DARMNRMVQN IVERSARRIE NGYFARMNRR NLMLRIVDGG VGVADIAEEG
     RLALDENGKV TSASSVTSRI LGQDAGKLAG RSVEELFEMD QSIFDVRPGA PITLHYHGRS
     LQAALCLPES RQPTRNSLVP ARPATPALGM VDLAEEALRI NPILSQSLDR AQRLLSAGLP
     LAITGEPGSG KTAFAKAVAR CCFGEDGQIV FIDCASLQSR DDLAALLQHR ISAQRTCLLV
     DRIDEMDGEH QTALLAVLEN DRQAGANGIG VIVISAQDLE HLARENLMRV DLVHRLKGGQ
     IGLPPLRSAP DLEDTILDLF RIERDALGRP EVELDEDSRL VLLHYHWPGN LRELRNTLRH
     AVALADGKQI GLEHLPDNIV EEIARKDLTA RSQSEASKIE AALRYNGGNV SLTARYLGVS
     RATLYRKIQI QKARGEA
//

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