(data stored in ACNUC7421 zone)

SWISSPROT: A8FPB9_SHESH

ID   A8FPB9_SHESH            Unreviewed;       433 AA.
AC   A8FPB9;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 76.
DE   SubName: Full=Sigma54 specific transcriptional regulator, fis family {ECO:0000313|EMBL:ABV34692.1};
GN   OrderedLocusNames=Ssed_0079 {ECO:0000313|EMBL:ABV34692.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34692.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34692.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34692.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV34692.1; -; Genomic_DNA.
DR   RefSeq; WP_012004218.1; NC_009831.1.
DR   ProteinModelPortal; A8FPB9; -.
DR   STRING; 425104.Ssed_0079; -.
DR   EnsemblBacteria; ABV34692; ABV34692; Ssed_0079.
DR   KEGG; sse:Ssed_0079; -.
DR   eggNOG; ENOG4105C1W; Bacteria.
DR   eggNOG; COG2204; LUCA.
DR   HOGENOM; HOG000058487; -.
DR   OMA; TRALRYK; -.
DR   OrthoDB; POG091H03UM; -.
DR   BioCyc; SSED425104:GH7Q-82-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008134; F:transcription factor binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   InterPro; IPR029995; TR_FlbD.
DR   PANTHER; PTHR32071:SF57; PTHR32071:SF57; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF52172; SSF52172; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
DR   PRODOM; A8FPB9.
DR   SWISS-2DPAGE; A8FPB9.
KW   ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00110192};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00814512};
KW   Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00110083};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00814760};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00193,
KW   ECO:0000256|SAAS:SAAS00814754}.
FT   DOMAIN      113    342       Sigma-54 factor interaction.
FT                                {ECO:0000259|PROSITE:PS50045}.
FT   NP_BIND     141    148       ATP. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00193}.
FT   NP_BIND     204    213       ATP. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00193}.
SQ   SEQUENCE   433 AA;  48584 MW;  EE2B1C3EB86FFABE CRC64;
     MPLSNFRLVD AALAEQCVEQ LSLQGFELWQ PGSDTPWISM IDLSSCTCDE LVKKLSLYPG
     KNQIALLDPE QTELATRAMQ LGVQDYLLLP LDGDQVISLL QRLRRLEQPD TDLVVSSTVS
     RQLLMLAHRA ATTEASVLLT GESGTGKEPI ARYIHQNSNR ANQPFIAVNC AAIPESILES
     ILFGHVKGAF TGASSDQPGK FELANGGTLL LDEIGEMPFI LQSKLLRVLQ EREVERLGGH
     RSIPLNIRVI ASTNKDLRKA VKSGEFREDL FYRLDVLPLK ISPLRERRED ILPLAEHFLQ
     RYKQLSDNQA CYFSEAAQQR LLSHDWPGNV RELENTIQRA LVMRRGQALQ AAELGIESKE
     HHAKVRVESS EQGLKASKRQ AEFQYILDTL KRFNGHRSQS AQSLGMTTRA LRYKLVQMRE
     EGIDIEQALG HAA
//

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