(data stored in ACNUC7421 zone)

SWISSPROT: A8FPP6_SHESH

ID   A8FPP6_SHESH            Unreviewed;       396 AA.
AC   A8FPP6;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 51.
DE   SubName: Full=GGDEF domain {ECO:0000313|EMBL:ABV34819.1};
GN   OrderedLocusNames=Ssed_0206 {ECO:0000313|EMBL:ABV34819.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34819.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34819.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34819.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34819.1; -; Genomic_DNA.
DR   RefSeq; WP_012004345.1; NC_009831.1.
DR   ProteinModelPortal; A8FPP6; -.
DR   STRING; 425104.Ssed_0206; -.
DR   EnsemblBacteria; ABV34819; ABV34819; Ssed_0206.
DR   KEGG; sse:Ssed_0206; -.
DR   eggNOG; ENOG4108S31; Bacteria.
DR   eggNOG; ENOG4111GJ9; LUCA.
DR   HOGENOM; HOG000218390; -.
DR   OMA; RKYSVAM; -.
DR   OrthoDB; POG091H049G; -.
DR   BioCyc; SSED425104:GH7Q-209-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   CDD; cd01949; GGDEF; 1.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   Pfam; PF00990; GGDEF; 2.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 2.
DR   PROSITE; PS50887; GGDEF; 1.
PE   4: Predicted;
DR   PRODOM; A8FPP6.
DR   SWISS-2DPAGE; A8FPP6.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     32       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     87    106       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    118    137       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    149    170       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    177    194       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    206    227       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      249    396       GGDEF. {ECO:0000259|PROSITE:PS50887}.
SQ   SEQUENCE   396 AA;  44917 MW;  40F7764E584C5628 CRC64;
     MSAFYHRCRY FFLPLLVTAF SLGLLQFTQA NWQIWQGSIN QLPFWLLVTA TALALQFNRS
     RLAYLATLLL LFYADKQHHL LPSSLSSYTE ANFLGGAMII TCFSFFKDRG LLSPHSLVRV
     FSIFLCFGMA YGWLWGIEHF QAEITAKSPL SLSFQFQAAL PLYLCGLLVL TRTLWQANLV
     NTSILITFVI WVLYDLTPGQ LPLSVLLSAL AVIFLFTILI DSYFLAYRDE LTGLASRRAL
     YNLVLSLGRK YSVAMLDIDH FKKFNDTYGH DVGDQVLKLV AAKMARVSGG GKVFRYGGEE
     FTIVFPRKDT DSVIDHLEDV RESIEEYRIV LRDDKRKRST KAKRNAANKS NKKTVSVTIS
     IGVAERLGGE TFDQTLKQAD EALYRAKKKG RNQICT
//

If you have problems or comments...

PBIL Back to PBIL home page