(data stored in ACNUC7421 zone)

SWISSPROT: A8FPW2_SHESH

ID   A8FPW2_SHESH            Unreviewed;       305 AA.
AC   A8FPW2;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABV34885.1};
GN   OrderedLocusNames=Ssed_0272 {ECO:0000313|EMBL:ABV34885.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV34885.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV34885.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV34885.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP000821; ABV34885.1; -; Genomic_DNA.
DR   RefSeq; WP_012004411.1; NC_009831.1.
DR   ProteinModelPortal; A8FPW2; -.
DR   STRING; 425104.Ssed_0272; -.
DR   EnsemblBacteria; ABV34885; ABV34885; Ssed_0272.
DR   KEGG; sse:Ssed_0272; -.
DR   eggNOG; ENOG4108Y3W; Bacteria.
DR   eggNOG; ENOG4111MUG; LUCA.
DR   HOGENOM; HOG000103695; -.
DR   OMA; FTRQGQH; -.
DR   OrthoDB; POG091H0FQL; -.
DR   BioCyc; SSED425104:GH7Q-275-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   4: Predicted;
DR   PRODOM; A8FPW2.
DR   SWISS-2DPAGE; A8FPW2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661574};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661597};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00253,
KW   ECO:0000256|SAAS:SAAS00661673}.
FT   DOMAIN        9     66       HTH lysR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50931}.
FT   DNA_BIND     26     45       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00253}.
SQ   SEQUENCE   305 AA;  34163 MW;  EDFED97BA3A94335 CRC64;
     MELEDIYRQD LSLLIALQIL VEECSVTRAA KRLHLSQSAT SRILARLREM LNDPLFSRVG
     QRLVPTQFAL DCYQQLQHPT GQLIEMLTPK VFVPEACKQK FTIAATDYAM QALVPFILPD
     IYRKAPNIQL EIIPVQHKEM QSQLSAQGAD MAICRAIGQT LQLNQEFLGK VGVSCLLSPG
     HPLANSELTL EDYLHYPHAT IAISDGVKAL LDAAISGHQA PTERLRTSHL DSALALLPFH
     ELLIILPAGM AQLAASKHRL RVKPLPFEIP ALDYNLFWHS RCELDKGQQW LRKEIATATQ
     RLLAD
//

If you have problems or comments...

PBIL Back to PBIL home page