(data stored in ACNUC7421 zone)

SWISSPROT: A8FQS0_SHESH

ID   A8FQS0_SHESH            Unreviewed;       625 AA.
AC   A8FQS0;
DT   13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2007, sequence version 1.
DT   07-JUN-2017, entry version 60.
DE   SubName: Full=GGDEF domain {ECO:0000313|EMBL:ABV35193.1};
GN   OrderedLocusNames=Ssed_0581 {ECO:0000313|EMBL:ABV35193.1};
OS   Shewanella sediminis (strain HAW-EB3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV35193.1, ECO:0000313|Proteomes:UP000002015};
RN   [1] {ECO:0000313|EMBL:ABV35193.1, ECO:0000313|Proteomes:UP000002015}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV35193.1,
RC   ECO:0000313|Proteomes:UP000002015};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA   Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D.,
RA   Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L.,
RA   Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella sediminis HAW-EB3.";
RL   Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000821; ABV35193.1; -; Genomic_DNA.
DR   RefSeq; WP_012140930.1; NC_009831.1.
DR   ProteinModelPortal; A8FQS0; -.
DR   STRING; 425104.Ssed_0581; -.
DR   EnsemblBacteria; ABV35193; ABV35193; Ssed_0581.
DR   KEGG; sse:Ssed_0581; -.
DR   eggNOG; ENOG4108MR2; Bacteria.
DR   eggNOG; ENOG4111GTA; LUCA.
DR   HOGENOM; HOG000011224; -.
DR   OMA; LTQNAFC; -.
DR   OrthoDB; POG091H049G; -.
DR   BioCyc; SSED425104:GH7Q-603-MONOMER; -.
DR   Proteomes; UP000002015; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   CDD; cd01949; GGDEF; 1.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   InterPro; IPR019734; TPR_repeat.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF13181; TPR_8; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00028; TPR; 3.
DR   SUPFAM; SSF48452; SSF48452; 2.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50005; TPR; 4.
PE   4: Predicted;
DR   PRODOM; A8FQS0.
DR   SWISS-2DPAGE; A8FQS0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002015};
KW   Membrane {ECO:0000256|SAM:Phobius}; Signal {ECO:0000256|SAM:SignalP};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     26       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        27    625       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5002721335.
FT   TRANSMEM    432    451       Helical. {ECO:0000256|SAM:Phobius}.
FT   REPEAT       65     98       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      187    220       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      268    301       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   REPEAT      308    341       TPR. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00339}.
FT   DOMAIN      490    623       GGDEF. {ECO:0000259|PROSITE:PS50887}.
SQ   SEQUENCE   625 AA;  71032 MW;  1C8374C3658E26E6 CRC64;
     MFFLLMKKWL TWLGCVLFVF STNGFASDAL TELERAAKAV SPADGIELLN KFDLKNSKLE
     AEQQAKVYYL YGQLYEKTRQ LDQSIASYDK GIELVKYLPI TDVLIDSHLE RSFALYLQSN
     DPAAYCVDRK QALVYARLHH NSELLAKTLT QNAFCFNEPK SIHKGIALLD EAMAIVDKNN
     LNVNRKALIY NATGSLYRQV GLHRRGYDSF EKAYQTWQSI NDIEDMFNMQ YNMLSEAISL
     GHWDKASQSV EAQFSLAAMS TGDNDMLFFS HLNAGRVALR TYDYDKAVLH LEKAVSLNHT
     TQEKYFISSN YLYLGLAYMR SGEAEKAADM ARTFKQDDSF AANQKAMLLQ ADAIIALDEH
     DPVNALNKLF QVIDIEREIN QSVIDNEVIS LSLDHNSALA EFENELLGNR LAINELSLAS
     VKDKERINEL KLSLFFIIVT VLFCIVLFLL ISRRTLKVRA QTDFLTGLAN RGHTFKKGQK
     IIEKTIKKQQ PASVIMFDID DFKSINDRYG HHIGDLAIKS VSKRTRRWLK KHDLVGRIGG
     EEFLIVLENT SQTEAYDIAD RLRHNIEEQF FQFDDVTVEL TISLGVAALN EHTTTLIGLM
     KQADDALYRA KFSGKNKVYL AAECA
//

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