(data stored in SCRATCH zone)

SWISSPROT: RF1_LACP7

ID   RF1_LACP7               Reviewed;         358 AA.
AC   A9KHD4;
DT   20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-FEB-2008, sequence version 1.
DT   11-DEC-2019, entry version 68.
DE   RecName: Full=Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093};
DE            Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};
GN   Name=prfA {ECO:0000255|HAMAP-Rule:MF_00093}; OrderedLocusNames=Cphy_0414;
OS   Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
OS   (Clostridium phytofermentans).
OC   Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.
OX   NCBI_TaxID=357809;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700394 / DSM 18823 / ISDg;
RA   Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L.,
RA   LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K.,
RA   Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T.,
RA   Bruce D., Detter J.C., Han C., Kuske C., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Kim E.A., Richardson P.;
RT   "Complete genome sequence of Clostridium phytofermentans ISDg.";
RL   Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Peptide chain release factor 1 directs the termination of
CC       translation in response to the peptide chain termination codons UAG and
CC       UAA. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00093}.
CC   -!- PTM: Methylated by PrmC. Methylation increases the termination
CC       efficiency of RF1. {ECO:0000255|HAMAP-Rule:MF_00093}.
CC   -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC       family. {ECO:0000255|HAMAP-Rule:MF_00093}.
DR   EMBL; CP000885; ABX40801.1; -; Genomic_DNA.
DR   RefSeq; WP_012198444.1; NC_010001.1.
DR   SMR; A9KHD4; -.
DR   STRING; 357809.Cphy_0414; -.
DR   EnsemblBacteria; ABX40801; ABX40801; Cphy_0414.
DR   KEGG; cpy:Cphy_0414; -.
DR   eggNOG; ENOG4105C8K; Bacteria.
DR   eggNOG; COG0216; LUCA.
DR   HOGENOM; HOG000074815; -.
DR   KO; K02835; -.
DR   OMA; DLFRMYQ; -.
DR   OrthoDB; 928964at2; -.
DR   BioCyc; CPHY357809:G1GAJ-461-MONOMER; -.
DR   Proteomes; UP000000370; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0016149; F:translation release factor activity, codon specific; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_00093; Rel_fac_1; 1.
DR   InterPro; IPR005139; PCRF.
DR   InterPro; IPR000352; Pep_chain_release_fac_I.
DR   InterPro; IPR004373; PrfA.
DR   Pfam; PF03462; PCRF; 1.
DR   Pfam; PF00472; RF-1; 1.
DR   SMART; SM00937; PCRF; 1.
DR   TIGRFAMs; TIGR00019; prfA; 1.
DR   PROSITE; PS00745; RF_PROK_I; 1.
PE   3: Inferred from homology;
DR   PRODOM; A9KHD4.
DR   SWISS-2DPAGE; A9KHD4.
KW   Cytoplasm; Methylation; Protein biosynthesis; Reference proteome.
FT   CHAIN           1..358
FT                   /note="Peptide chain release factor 1"
FT                   /id="PRO_1000075490"
FT   MOD_RES         233
FT                   /note="N5-methylglutamine"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_00093"
SQ   SEQUENCE   358 AA;  40665 MW;  C7EBF62D1D337B35 CRC64;
     MFDKLEDLLI RFQEIQNELN EPTVTNDQAR FRKLMKEQND LGEIVDKYLE YKQTKKNIEE
     SLELLDEESD EEMRELAKEE LSTSKANLVV IEEQLKILLL PKDPNDSKNV IVEIRGGAGG
     DEAALFAAEL FRMYSKYAET MRWKIDMMNL NENGIGGFKE VIFMINGQGA YSKLKYESGV
     HRVQRIPVTE SGGRIHTSTV TVAIMPEAEE VDVELNMNDC RFDVFRSSGN GGQCVNTTDS
     AVRLTHMPTG IVISCQDEKS QLKNRDKALK VLRARLYELE LEKAHDAEAA ARKSQVGTGD
     RSEKIRTYNF PQGRCTDHRI KLTSHRLDDI MNGDLQEVID SLTAADQAAK LSNMQDEY
//

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