SWISSPROT: B1K1W2_BURCC

ID   B1K1W2_BURCC            Unreviewed;       511 AA.
AC   B1K1W2;
DT   29-APR-2008, integrated into UniProtKB/TrEMBL.
DT   29-APR-2008, sequence version 1.
DT   08-MAY-2019, entry version 73.
DE   SubName: Full=RNA polymerase, sigma 70 subunit, RpoD family {ECO:0000313|EMBL:ACA92541.1};
GN   OrderedLocusNames=Bcenmc03_3387 {ECO:0000313|EMBL:ACA92541.1};
OS   Burkholderia cenocepacia (strain MC0-3).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX   NCBI_TaxID=406425 {ECO:0000313|EMBL:ACA92541.1, ECO:0000313|Proteomes:UP000002169};
RN   [1] {ECO:0000313|Proteomes:UP000002169}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MC0-3 {ECO:0000313|Proteomes:UP000002169};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L.,
RA   Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P.,
RA   Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Mikhailova N., Tiedje J., Richardson P.;
RT   "Complete sequence of chromosome 2 of Burkholderia cenocepacia MC0-
RT   3.";
RL   Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Sigma factors are initiation factors that promote the
CC       attachment of RNA polymerase to specific initiation sites and are
CC       then released. {ECO:0000256|SAAS:SAAS00554769}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; CP000959; ACA92541.1; -; Genomic_DNA.
DR   RefSeq; WP_012338341.1; NC_010515.1.
DR   EnsemblBacteria; ACA92541; ACA92541; Bcenmc03_3387.
DR   KEGG; bcm:Bcenmc03_3387; -.
DR   HOGENOM; HOG000270272; -.
DR   KO; K03086; -.
DR   OMA; TRMRECV; -.
DR   BioCyc; BCEN406425:G1GBC-3593-MONOMER; -.
DR   Proteomes; UP000002169; Chromosome 2.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR007127; RNA_pol_sigma_70_r1_1.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF03979; Sigma70_r1_1; 1.
DR   Pfam; PF00140; Sigma70_r1_2; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; SSF88659; 2.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR   PROSITE; PS00715; SIGMA70_1; 1.
PE   3: Inferred from homology;
DR   PRODOM; B1K1W2.
DR   SWISS-2DPAGE; B1K1W2.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002169};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN      302    315       RNA_pol_sigma70. {ECO:0000259|PROSITE:
FT                                PS00715}.
FT   COILED      485    505       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   511 AA;  55155 MW;  BCCCEFE1FA9C6B75 CRC64;
     MTTPRPTPRA DTPLDPIIQL LALAGEQGYL THADLVDALP PESDSPDALD VVRAALADIG
     IAVLDEPAVP APFAGAAPVE VDRDALDEGR AMLGDLARGT SASTDPLALY MRRMHAVPLL
     TREGEIVLAR EIETGRHQVL HAIAGYPPAV DVLLERHRTR SATGANGSPD EEDGETPAPA
     RYDALQAAVS ALRDALHAHG SRSANYRDAR NHVAALLGSL AWVAPAVDDA SRAVRALAAA
     SDDPSTADAA YFDAVARRAL AAALSDGQQK VRDATRAMLE ANLRLVLSIA RKYLNRGVDL
     SDLVQDGCLG LMRAIEKFEY RRGFKFSTYA TWWIRQAIAR AVADRSRTIR VPVHVGDQYQ
     RVQRHALRFR QRTGRRATPA ELAAETGLDE GKLRAVLALP AEPVSLDTPL PDADTGLVEL
     IEDQASASPF EQLADTRMRE CVRALLRSVT PTEADVLRRR FGLGGAEPDT YDAIAQDAGM
     SRERVRQIEK RALAALRTAA EAENAQSFLD A
//