(data stored in ACNUC7421 zone)

SWISSPROT: B4SR30_STRM5

ID   B4SR30_STRM5            Unreviewed;       825 AA.
AC   B4SR30;
DT   23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT   23-SEP-2008, sequence version 1.
DT   08-MAY-2019, entry version 57.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:ACF49731.1};
GN   OrderedLocusNames=Smal_0026 {ECO:0000313|EMBL:ACF49731.1};
OS   Stenotrophomonas maltophilia (strain R551-3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Stenotrophomonas;
OC   Stenotrophomonas maltophilia group.
OX   NCBI_TaxID=391008 {ECO:0000313|EMBL:ACF49731.1, ECO:0000313|Proteomes:UP000001867};
RN   [1] {ECO:0000313|EMBL:ACF49731.1, ECO:0000313|Proteomes:UP000001867}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=R551-3 {ECO:0000313|EMBL:ACF49731.1,
RC   ECO:0000313|Proteomes:UP000001867};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L.,
RA   Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Mikhailova N., Taghavi S., Monchy S., Newman L., Vangronsveld J.,
RA   van der Lelie D., Richardson P.;
RT   "Complete sequence of Stenotrophomonas maltophilia R551-3.";
RL   Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001111; ACF49731.1; -; Genomic_DNA.
DR   RefSeq; WP_012509613.1; NC_011071.1.
DR   STRING; 391008.Smal_0026; -.
DR   EnsemblBacteria; ACF49731; ACF49731; Smal_0026.
DR   KEGG; smt:Smal_0026; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; YMANLGC; -.
DR   OrthoDB; 2061599at2; -.
DR   BioCyc; SMAL391008:SMAL_RS00130-MONOMER; -.
DR   Proteomes; UP000001867; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
DR   PRODOM; B4SR30.
DR   SWISS-2DPAGE; B4SR30.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001867};
KW   Ligase {ECO:0000313|EMBL:ACF49731.1}.
FT   DOMAIN      327    423       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   825 AA;  90926 MW;  3E13973E03275C05 CRC64;
     MSLHQYRRKR RLGGGAGQTP EPDDTPARGD PKRRPTFVIQ LHHASSRHYD FRLEMDGVLK
     SWAVPKGPSL RVGEKRLAVE VEDHPLSYAG FEGDIPEGHY GAGHVDVFDH GTWACEGDPL
     QALAAGKIDF VLHGQRLAGG WKLVRTAMKG RQVQWLLIKR DDGEARDAEA DDLLTAPMPK
     RAPAAKKRSV ERAAAAARTT TRKADARWHA RALKLDGARD TPYPRAFKPQ LTDHRDSAPD
     GARWLHEIKW DGYRLLADLH DGEVKLRSRN GLDWTDDFPE LVQAVLALPV RDARLDGELV
     VLDPDGRSDF AALQRVIDGS SKQPLRYIVF DLPGVAGVDI SRVPLLERKA LLKDLIGPAP
     GTLAFSEHVI DHGPQVFDAS GGAGFEGIVS KQVDAPYVNT RARSWVKVKH EDTDEFVIVG
     HTAPKGSRVG FGSLLLATPD KAGLRYVGRV GTGFDDDSLR ALLKALQPLA VNAPVLQLPA
     HVPFRAASVR WVKPVTVAEV AFRGWGKEGL LRQASFKRLR SDKQKEDLGM STADTEAGGE
     VQITHPERVV FPKEKLSKGD VADYYQRVAR WILPELAGRP LSLLRCPDGV GRACFFQKHH
     GPGLGDAVHA VPLQQKSGRE DYVYIDDARG LLQLVQMNTL ELHPWGATVI DPEHPDRLVF
     DLDPGEGVSW AQVKAGARDV RDRLQQVGLK SFVRLSGGKG VHVVVPMQPK AGWDEAKAFC
     EAFAQAMALE QPDRYVATMS KAKRNGVIFI DWLRNTRGAT SVCSWSLRAR DGAGVAVPLR
     WEELARVSAA DAFPMAKALA RAKRLKGDPW QGIERLKQTL PSLKR
//

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