(data stored in ACNUC7421 zone)

SWISSPROT: B4SIB4_STRM5

ID   B4SIB4_STRM5            Unreviewed;       420 AA.
AC   B4SIB4;
DT   23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT   23-SEP-2008, sequence version 1.
DT   08-MAY-2019, entry version 67.
DE   SubName: Full=Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACF50119.1};
GN   OrderedLocusNames=Smal_0414 {ECO:0000313|EMBL:ACF50119.1};
OS   Stenotrophomonas maltophilia (strain R551-3).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Stenotrophomonas;
OC   Stenotrophomonas maltophilia group.
OX   NCBI_TaxID=391008 {ECO:0000313|EMBL:ACF50119.1, ECO:0000313|Proteomes:UP000001867};
RN   [1] {ECO:0000313|EMBL:ACF50119.1, ECO:0000313|Proteomes:UP000001867}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=R551-3 {ECO:0000313|EMBL:ACF50119.1,
RC   ECO:0000313|Proteomes:UP000001867};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L.,
RA   Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Mikhailova N., Taghavi S., Monchy S., Newman L., Vangronsveld J.,
RA   van der Lelie D., Richardson P.;
RT   "Complete sequence of Stenotrophomonas maltophilia R551-3.";
RL   Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC       {ECO:0000256|SAAS:SAAS00611284}.
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DR   EMBL; CP001111; ACF50119.1; -; Genomic_DNA.
DR   RefSeq; WP_012509914.1; NC_011071.1.
DR   STRING; 391008.Smal_0414; -.
DR   EnsemblBacteria; ACF50119; ACF50119; Smal_0414.
DR   KEGG; smt:Smal_0414; -.
DR   eggNOG; ENOG4105CHP; Bacteria.
DR   eggNOG; COG4941; LUCA.
DR   HOGENOM; HOG000152991; -.
DR   OMA; ICCHPEL; -.
DR   OrthoDB; 1469807at2; -.
DR   BioCyc; SMAL391008:SMAL_RS02135-MONOMER; -.
DR   Proteomes; UP000001867; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; B4SIB4.
DR   SWISS-2DPAGE; B4SIB4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001867};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       21     81       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      119    170       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   420 AA;  46434 MW;  4235BA078570EDA8 CRC64;
     MLEPALTQRL ETLWRMESPV LIARLARLLG GDVGRAEELA QDTWLAALER WPEQGIPDNP
     GAWLMTTARN RAIDVLRQHQ RVAQQHAQWG EELHPAPLPA PDDSQALEDD LGDDLLRLMF
     VACHPVLPAD ARVALTLRLL GGLTTVEIAR AFLQPEPTIA QRIVRAKRTL AQKQVPYEVP
     RADAMPERLG SVLEAIYLVF NEGYAASAGD DWMRPALCEE ALRLARILAH RLPVPPVLGL
     LALMELQASR AAARTDAQGV PVLLDQQNRA RWDWLQIERG QQVLARALAA GGADDPYVLQ
     ARIAACHAAA RRPEDTDWPR IAALYTQLLQ VQPSPVVALN RVVAVLRSDG AFAAWAQLQP
     LLVDARLREY APLQVVRGEL LQALGRDLDA RHAFAEAARL SQNQAERGLL RQRAGLPPTE
//

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