(data stored in ACNUC7421 zone)

SWISSPROT: C1D1Z8_DEIDV

ID   C1D1Z8_DEIDV            Unreviewed;       262 AA.
AC   C1D1Z8;
DT   26-MAY-2009, integrated into UniProtKB/TrEMBL.
DT   26-MAY-2009, sequence version 1.
DT   11-DEC-2019, entry version 58.
DE   SubName: Full=Putative transposase {ECO:0000313|EMBL:ACO47437.1};
GN   OrderedLocusNames=Deide_1p00381 {ECO:0000313|EMBL:ACO47437.1},
GN   Deide_2p00731 {ECO:0000313|EMBL:ACO47736.1};
OS   Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).
OG   Plasmid 1 {ECO:0000313|EMBL:ACO47437.1},
OG   Plasmid 2 {ECO:0000313|EMBL:ACO47736.1},
OG   Plasmid pDeide1 {ECO:0000313|Proteomes:UP000002208}, and
OG   Plasmid pDeide2 {ECO:0000313|Proteomes:UP000002208}.
OC   Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae;
OC   Deinococcus.
OX   NCBI_TaxID=546414 {ECO:0000313|EMBL:ACO47437.1, ECO:0000313|Proteomes:UP000002208};
RN   [1] {ECO:0000313|EMBL:ACO47437.1, ECO:0000313|Proteomes:UP000002208}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=1 {ECO:0000313|EMBL:ACO47437.1}, 2
RC   {ECO:0000313|EMBL:ACO47736.1}, Plasmid pDeide1, Plasmid pDeide2,
RC   VCD115 {ECO:0000313|EMBL:ACO47437.1}, and VCD115 / DSM 17065 / LMG
RC   22923 {ECO:0000313|Proteomes:UP000002208};
RC   PLASMID=1 {ECO:0000313|EMBL:ACO47437.1}, 2
RC   {ECO:0000313|EMBL:ACO47736.1}, Plasmid pDeide1
RC   {ECO:0000313|Proteomes:UP000002208}, and Plasmid pDeide2
RC   {ECO:0000313|Proteomes:UP000002208};
RX   PubMed=19370165; DOI=10.1371/journal.pgen.1000434;
RA   de Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B.,
RA   Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M.,
RA   Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Armengaud J.;
RT   "Alliance of proteomics and genomics to unravel the specificities of Sahara
RT   bacterium Deinococcus deserti.";
RL   PLoS Genet. 5:E1000434-E1000434(2009).
RN   [2] {ECO:0000313|EMBL:ACO47437.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=VCD115 {ECO:0000313|EMBL:ACO47437.1};
RC   PLASMID=1 {ECO:0000313|EMBL:ACO47437.1}, and 2
RC   {ECO:0000313|EMBL:ACO47736.1};
RX   PubMed=19875382; DOI=10.1074/mcp.M900359-MCP200;
RA   Baudet M., Ortet P., Gaillard J.C., Fernandez B., Guerin P., Enjalbal C.,
RA   Subra G., de Groot A., Barakat M., Dedieu A., Armengaud J.;
RT   "Proteomics-based refinement of Deinococcus deserti genome annotation
RT   reveals an unwonted use of non-canonical translation initiation codons.";
RL   Mol. Cell. Proteomics 9:415-426(2010).
RN   [3] {ECO:0000313|EMBL:ACO47437.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=VCD115 {ECO:0000313|EMBL:ACO47437.1};
RC   PLASMID=1 {ECO:0000313|EMBL:ACO47437.1}, and 2
RC   {ECO:0000313|EMBL:ACO47736.1};
RA   De Groot A., Dulermo R., Ortet P., Blanchard L., Guerin P., Fernandez B.,
RA   Vacherie B., Dossat C., Jolivet E., Siguier P., Chandler M., Barakat M.,
RA   Dedieu A., Barbe V., Heulin T., Sommer S., Achouak W., Jean A.;
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:ACO47437.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=VCD115; PLASMID=1, and 2;
RX   PubMed=24723731; DOI=10.1093/gbe/evu069;
RA   de Groot A., Roche D., Fernandez B., Ludanyi M., Cruveiller S., Pignol D.,
RA   Vallenet D., Armengaud J., Blanchard L.;
RT   "RNA Sequencing and Proteogenomics Reveal the Importance of Leaderless
RT   mRNAs in the Radiation-Tolerant Bacterium Deinococcus deserti.";
RL   Genome Biol. Evol. 6:932-948(2014).
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DR   EMBL; CP001115; ACO47437.1; -; Genomic_DNA.
DR   EMBL; CP001116; ACO47736.1; -; Genomic_DNA.
DR   EnsemblBacteria; ACO47437; ACO47437; Deide_1p00381.
DR   EnsemblBacteria; ACO47736; ACO47736; Deide_2p00731.
DR   KEGG; ddr:Deide_1p00381; -.
DR   KEGG; ddr:Deide_2p00731; -.
DR   eggNOG; ENOG4105DQ6; Bacteria.
DR   eggNOG; COG2801; LUCA.
DR   HOGENOM; HOG000023132; -.
DR   OMA; IAHYNER; -.
DR   Proteomes; UP000002208; Plasmid pDeide1.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; -; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
DR   PRODOM; C1D1Z8.
DR   SWISS-2DPAGE; C1D1Z8.
KW   Plasmid {ECO:0000313|EMBL:ACO47437.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002208}.
FT   DOMAIN          97..260
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   262 AA;  30195 MW;  FF470580873BBD0C CRC64;
     MSGYHSWRRR PICDRKEEDA LLEQRIQEVH QRSKRRYGAP RIHAELHAGG VRVSRKRVAR
     LMRASGLRAK GKRRWVRTTE SSHTMAVCPN LLERRFEVSQ PNQVWALDLT YLPTKEGWLY
     LAVTLDLHSR AVVGYAMDMQ MPATLPLAAL QMAAGRRLPP PGLLHHSDRG SQYASGIFQA
     ELARMRARGS MSRKGDCWDN AVVESFFSSL KRELLEDTIF ETRDVARQAV FEFIEVFYNR
     QRRHSSLGYL TPLEFERQAT AA
//

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