(data stored in ACNUC7421 zone)

SWISSPROT: C3MEI4_SINFN

ID   C3MEI4_SINFN            Unreviewed;       424 AA.
AC   C3MEI4;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 59.
DE   SubName: Full=Putative RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACP23807.1};
GN   OrderedLocusNames=NGR_c00030 {ECO:0000313|EMBL:ACP23807.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP23807.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP23807.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001389; ACP23807.1; -; Genomic_DNA.
DR   RefSeq; WP_012706592.1; NC_012587.1.
DR   RefSeq; YP_002824560.1; NC_012587.1.
DR   STRING; 394.NGR_c00030; -.
DR   EnsemblBacteria; ACP23807; ACP23807; NGR_c00030.
DR   GeneID; 7790582; -.
DR   KEGG; rhi:NGR_c00030; -.
DR   PATRIC; fig|394.7.peg.2793; -.
DR   eggNOG; ENOG4105CHP; Bacteria.
DR   eggNOG; COG4941; LUCA.
DR   HOGENOM; HOG000152991; -.
DR   KO; K03088; -.
DR   OMA; VCDLTTE; -.
DR   OrthoDB; POG091H08O2; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.25.40.10; -; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF48452; SSF48452; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C3MEI4.
DR   SWISS-2DPAGE; C3MEI4.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       14     77       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      122    164       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   424 AA;  47060 MW;  31D0603809DB573A CRC64;
     MTDTAWIDLA LVSARPQAMG ALLRYFRNLD LAEEAFQEAC IRALKTWPTN GPPRDPAAWL
     IFVGRNSGID RVRRQSRETA LPPEELLSDI EDRESELADR LDGAHYRDDI LRLLFVCSNP
     VLPATQQIAL ALRIVSGLSV KQIARAFLVG EAAMEQRITR AKARVTAAGI PFETPDASER
     AERLAAVAMM IYLVFNEGYS AMNGPEGVSA DLCDEAIRLA RLLLRLFPAE PEIMGLTALL
     LLQHSRARAR FDAHGAIVLL EDQDRQLWSL PMITEALAMI DKAMRHRRPG PYQVQAAIAA
     LHARAERSEQ TDWEEIELLY RALERLQPSP VVTLNRAVAV SKRDGPEAAL ALVEPLADRL
     SGYFYFHGLR GGLLKQMGRA REARVAFDRA IALATNAAEA AYIRKQLDHL AGEAGASHLH
     EDQQ
//

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