(data stored in ACNUC7421 zone)

SWISSPROT: C3MGU9_SINFN

ID   C3MGU9_SINFN            Unreviewed;       607 AA.
AC   C3MGU9;
DT   16-JUN-2009, integrated into UniProtKB/TrEMBL.
DT   16-JUN-2009, sequence version 1.
DT   07-JUN-2017, entry version 55.
DE   RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};
DE            EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
GN   OrderedLocusNames=NGR_c04180 {ECO:0000313|EMBL:ACP24214.1};
OS   Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=394 {ECO:0000313|EMBL:ACP24214.1, ECO:0000313|Proteomes:UP000001054};
RN   [1] {ECO:0000313|EMBL:ACP24214.1, ECO:0000313|Proteomes:UP000001054}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NBRC 101917 / NGR234 {ECO:0000313|Proteomes:UP000001054};
RX   PubMed=19376903; DOI=10.1128/AEM.00515-09;
RA   Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA   Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA   Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA   Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT   "Rhizobium sp. strain NGR234 possesses a remarkable number of
RT   secretion systems.";
RL   Appl. Environ. Microbiol. 75:4035-4045(2009).
CC   -!- SIMILARITY: Belongs to the pseudouridine synthase RsuA family.
CC       {ECO:0000256|RuleBase:RU003887, ECO:0000256|SAAS:SAAS00806985}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001389; ACP24214.1; -; Genomic_DNA.
DR   RefSeq; WP_012706999.1; NC_012587.1.
DR   RefSeq; YP_002824967.1; NC_012587.1.
DR   STRING; 394.NGR_c04180; -.
DR   EnsemblBacteria; ACP24214; ACP24214; NGR_c04180.
DR   GeneID; 7791644; -.
DR   KEGG; rhi:NGR_c04180; -.
DR   PATRIC; fig|394.7.peg.3224; -.
DR   eggNOG; ENOG4105FE9; Bacteria.
DR   eggNOG; COG1187; LUCA.
DR   HOGENOM; HOG000044954; -.
DR   KO; K06178; -.
DR   OMA; NGPRDFR; -.
DR   OrthoDB; POG091H02IO; -.
DR   Proteomes; UP000001054; Chromosome.
DR   GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR   InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR   InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluD.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   PANTHER; PTHR21600; PTHR21600; 1.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00093; TIGR00093; 1.
DR   PROSITE; PS01149; PSI_RSU; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
DR   PRODOM; C3MGU9.
DR   SWISS-2DPAGE; C3MGU9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001054};
KW   Isomerase {ECO:0000256|RuleBase:RU003887,
KW   ECO:0000256|SAAS:SAAS00806980}; Lyase {ECO:0000313|EMBL:ACP24214.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001054};
KW   RNA-binding {ECO:0000256|SAAS:SAAS00082949}.
FT   DOMAIN       47    115       S4 RNA-binding. {ECO:0000259|PROSITE:
FT                                PS50889}.
SQ   SEQUENCE   607 AA;  66522 MW;  6FEE70B9559B5AC7 CRC64;
     MTFKDKSTGP GKGKGRKGNY SSGEKKANAA RPGNAAPKAD AGLDEPQRIS KILSRAGVAS
     RRDIERMIME GRVKLNGVVL ETPVVNATLA DQIEVDGHPI RGIERTRLWL YYKPAGLVTT
     NSDPEGRPTV FDNLPDELPR VLSVGRLDIN TEGLLLLTND GGLARALELP STGWLRRYRV
     RAHGEIDQEA LDRLKEGIAV DGVLYGAIEA TLDRVQGSNV WITMGLREGK NREIKNVLGA
     LGLDVNRLIR ISYGPFQLGE LPEGHVQEIR GRTLRDQLGP RLIAESKANF DAPLYNDQPA
     APEREAHNEV APEWGKERSA RREKPEDKRE RALARLDTQR DDSRSRDRRE RPREKFEDRP
     ARPPAKRSRT ANVWMAPGAR PVAEKKPKGA EEDTSPKPAR RERPEGAPKT KRYGRTKDGA
     ATKTSAKFDP DRKARPAKAD ARPDRAPRPP VKRADEDGDW ISASEPVRRK DEARDGGFER
     RRPFDSGERK SRDHGDRPPR REGSERPRGE RPARAAGDSR AFSEKPRTSR SKDDRPQGRE
     GGDRPFGDRP RGKAPGGKPA GGKSFGQRSG GPRGGGKPGG GKPGGGRPGG GKPGGRTGGG
     KPRGKGK
//

If you have problems or comments...

PBIL Back to PBIL home page