(data stored in ACNUC7421 zone)

SWISSPROT: C5BC90_EDWI9

ID   C5BC90_EDWI9            Unreviewed;       332 AA.
AC   C5BC90;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 2.
DT   07-JUN-2017, entry version 62.
DE   SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACR67381.2};
GN   OrderedLocusNames=NT01EI_0126 {ECO:0000313|EMBL:ACR67381.2};
OS   Edwardsiella ictaluri (strain 93-146).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Hafniaceae; Edwardsiella.
OX   NCBI_TaxID=634503 {ECO:0000313|EMBL:ACR67381.2, ECO:0000313|Proteomes:UP000001485};
RN   [1] {ECO:0000313|Proteomes:UP000001485}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=93-146 {ECO:0000313|Proteomes:UP000001485};
RA   Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C.,
RA   Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.;
RT   "Complete genome sequence of Edwardsiella ictaluri 93-146.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001600; ACR67381.2; -; Genomic_DNA.
DR   RefSeq; WP_015869600.1; NC_012779.2.
DR   STRING; 634503.NT01EI_0126; -.
DR   EnsemblBacteria; ACR67381; ACR67381; NT01EI_0126.
DR   GeneID; 7959840; -.
DR   KEGG; eic:NT01EI_0126; -.
DR   PATRIC; fig|634503.3.peg.116; -.
DR   eggNOG; ENOG4105DIQ; Bacteria.
DR   eggNOG; ENOG410XPSF; LUCA.
DR   HOGENOM; HOG000220181; -.
DR   KO; K06145; -.
DR   OrthoDB; POG091H01VT; -.
DR   Proteomes; UP000001485; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   CDD; cd01392; HTH_LacI; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR000843; HTH_LacI.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom.
DR   InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF00356; LacI; 1.
DR   Pfam; PF00532; Peripla_BP_1; 1.
DR   SMART; SM00354; HTH_LACI; 1.
DR   SUPFAM; SSF47413; SSF47413; 1.
DR   SUPFAM; SSF53822; SSF53822; 1.
DR   PROSITE; PS50932; HTH_LACI_2; 1.
PE   4: Predicted;
DR   PRODOM; C5BC90.
DR   SWISS-2DPAGE; C5BC90.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001485};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00111,
KW   ECO:0000256|SAAS:SAAS00791655};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001485};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00111,
KW   ECO:0000256|SAAS:SAAS00791690};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00111,
KW   ECO:0000256|SAAS:SAAS00791673}.
FT   DOMAIN        6     60       HTH lacI-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50932}.
FT   DNA_BIND      8     27       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00111}.
SQ   SEQUENCE   332 AA;  36766 MW;  8C9AD432FE4EB606 CRC64;
     MKKKRPVLQD IADRVGVTKM TVSRYLRNPE LVSLPLRGKI AAALDELGYI PNRAPDILSN
     ATSRAIGVLL PSLTNQVFAE VLRGIESVTD QHHYQTMLAH YGYHKEKEEE RLTSLLSYNI
     DGLILAERDH TPRTLKMIEV AGIPVVELMD SISPCLDMAV GFDNVEAARA MTQVIIARGH
     RRTVYFGARL DERTVMKQQG YEAAMYAAGL TPRSVMIPRS SSYSVGGELL REALKRYPDM
     DSIFCTNDDL AVGAAFECQR LGLRIPQDMA IAGFHGHDIG QVMEPQLASV LTPRQRMGQL
     AAERLLARLR GERRAESAAI DVGFTLLYGG SI
//

If you have problems or comments...

PBIL Back to PBIL home page