(data stored in ACNUC7421 zone)

SWISSPROT: C5BHE4_EDWI9

ID   C5BHE4_EDWI9            Unreviewed;      1406 AA.
AC   C5BHE4;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   07-JUN-2017, entry version 57.
DE   RecName: Full=DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE            Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE            EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};
DE   AltName: Full=RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
DE   AltName: Full=Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};
GN   Name=rpoC {ECO:0000256|HAMAP-Rule:MF_01322};
GN   OrderedLocusNames=NT01EI_0175 {ECO:0000313|EMBL:ACR67422.1};
OS   Edwardsiella ictaluri (strain 93-146).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Hafniaceae; Edwardsiella.
OX   NCBI_TaxID=634503 {ECO:0000313|EMBL:ACR67422.1, ECO:0000313|Proteomes:UP000001485};
RN   [1] {ECO:0000313|Proteomes:UP000001485}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=93-146 {ECO:0000313|Proteomes:UP000001485};
RA   Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C.,
RA   Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.;
RT   "Complete genome sequence of Edwardsiella ictaluri 93-146.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription
CC       of DNA into RNA using the four ribonucleoside triphosphates as
CC       substrates. {ECO:0000256|HAMAP-Rule:MF_01322,
CC       ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00365746}.
CC   -!- CATALYTIC ACTIVITY: Nucleoside triphosphate + RNA(n) = diphosphate
CC       + RNA(n+1). {ECO:0000256|HAMAP-Rule:MF_01322,
CC       ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00365855}.
CC   -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1
CC       beta' and 1 omega subunit. When a sigma factor is associated with
CC       the core the holoenzyme is formed, which can initiate
CC       transcription. {ECO:0000256|HAMAP-Rule:MF_01322}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279}.
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DR   EMBL; CP001600; ACR67422.1; -; Genomic_DNA.
DR   RefSeq; WP_015869634.1; NC_012779.2.
DR   STRING; 634503.NT01EI_0175; -.
DR   EnsemblBacteria; ACR67422; ACR67422; NT01EI_0175.
DR   GeneID; 7958767; -.
DR   KEGG; eic:NT01EI_0175; -.
DR   PATRIC; fig|634503.3.peg.158; -.
DR   eggNOG; ENOG4105D27; Bacteria.
DR   eggNOG; COG0086; LUCA.
DR   HOGENOM; HOG000218386; -.
DR   KO; K03046; -.
DR   OMA; YFAAYMI; -.
DR   OrthoDB; POG091H02K5; -.
DR   Proteomes; UP000001485; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-HAMAP.
DR   HAMAP; MF_01322; RNApol_bact_RpoC; 1.
DR   InterPro; IPR012754; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   TIGRFAMs; TIGR02386; rpoC_TIGR; 1.
PE   3: Inferred from homology;
DR   PRODOM; C5BHE4.
DR   SWISS-2DPAGE; C5BHE4.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000001485};
KW   DNA-directed RNA polymerase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00054060,
KW   ECO:0000313|EMBL:ACR67422.1};
KW   Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00054058,
KW   ECO:0000313|EMBL:ACR67422.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001485};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00054043};
KW   Transferase {ECO:0000256|HAMAP-Rule:MF_01322,
KW   ECO:0000256|RuleBase:RU004279, ECO:0000256|SAAS:SAAS00054034,
KW   ECO:0000313|EMBL:ACR67422.1}.
FT   DOMAIN      235    514       RPOLA_N. {ECO:0000259|SMART:SM00663}.
FT   COILED      184    211       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1406 AA;  154787 MW;  234008F16A2F97FD CRC64;
     MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
     IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
     PSRIGLLLDM PLRDIERVLY FESYVVVEGG MTNLERRQIL TEEQYLDALE EFGDEFDAKM
     GAEAIQALLK GMDLEAECEQ LREELGETNS ETKRKKLTKR IKLLEAFILS GNKPEWMILT
     VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
     EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
     LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
     VMLNRAPTLH RLGIQAFEPL LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
     RALMMSTNNI LSPANGDPII VPSQDVVLGL YYMTRDCVNA KGEGMVLSGP KEAERIYRAG
     LASLHARVKV RITQYSKSAD GEMVPNTGLI DTTVGRAILW MIVPKGLPYS IVNQPLGKKA
     ISKMLNACYR ALGLKPTVIF ADQIMYTGFA YAARSGASVG IDDMVIPEKK AGIIAEAEAE
     VAEIQEQFQS GLVTAGERYN KVIDIWAAAN ERVAKAMMEN LSSETVINRD GEEERQVSFN
     SIFMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
     KGLADTALKT ANSGYLTRRL VDVAQDLVVI EDDCGTHNGI VMTPVIEGGD VKEPLRDRVL
     GRVTAEEVLK PGTADILVPR NTLLNEKWCD LLEEHSVDSV KVRSVVSCET DFGVCAHCYG
     RDLARGHLVN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGNLKL
     SNAKFVVNSD GKLVITSRNT ELKLIDEFGR TKESYKVPYG ATLAKGDSAE VNGGETVANW
     DPHTMPVITE VSGFIRFADM IDGQTVTRQT DELTGLSSQV VLDSAERTGS GKDLRPALKI
     VDANGDDVLL PGTDMPAQYF LPGKAIVQLE DGIAISAGDT LARIPQESGG TKDITGGLPR
     VADLFEARRP KEPAILAEIS GVVSFGKETK GKRRLVITPL DGSDTYEEMI PKWRQLNVFE
     GERVERGDVI SDGPESPHDI LRLRGVNAVT RYIVNEVQDV YRLQGVKIND KHIEVIVRQM
     LRKATIANAG SSEFLEGEQV EVSRVKIANR LLESDGKIAA TYMRDLLGIT KASLATESFI
     SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRSTDTSSA
     PQVSAEEASA NLAELLNAGL LGGNDE
//

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