(data stored in ACNUC7421 zone)

SWISSPROT: C5BDN1_EDWI9

ID   C5BDN1_EDWI9            Unreviewed;       102 AA.
AC   C5BDN1;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-NOV-2012, sequence version 2.
DT   07-JUN-2017, entry version 54.
DE   RecName: Full=RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00767892};
GN   Name=hfq {ECO:0000256|HAMAP-Rule:MF_00436};
GN   OrderedLocusNames=NT01EI_0409 {ECO:0000313|EMBL:ACR67647.2};
OS   Edwardsiella ictaluri (strain 93-146).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Hafniaceae; Edwardsiella.
OX   NCBI_TaxID=634503 {ECO:0000313|EMBL:ACR67647.2, ECO:0000313|Proteomes:UP000001485};
RN   [1] {ECO:0000313|Proteomes:UP000001485}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=93-146 {ECO:0000313|Proteomes:UP000001485};
RA   Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C.,
RA   Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.;
RT   "Complete genome sequence of Edwardsiella ictaluri 93-146.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: RNA chaperone that binds small regulatory RNA (sRNAs)
CC       and mRNAs to facilitate mRNA translational regulation in response
CC       to envelope stress, environmental stress and changes in metabolite
CC       concentrations. Also binds with high specificity to tRNAs.
CC       {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00767907}.
CC   -!- SUBUNIT: Homohexamer. {ECO:0000256|HAMAP-Rule:MF_00436,
CC       ECO:0000256|SAAS:SAAS00767902}.
CC   -!- SIMILARITY: Belongs to the Hfq family. {ECO:0000256|HAMAP-
CC       Rule:MF_00436, ECO:0000256|SAAS:SAAS00767909}.
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DR   EMBL; CP001600; ACR67647.2; -; Genomic_DNA.
DR   RefSeq; WP_014524170.1; NC_012779.2.
DR   ProteinModelPortal; C5BDN1; -.
DR   STRING; 634503.NT01EI_0409; -.
DR   EnsemblBacteria; ACR67647; ACR67647; NT01EI_0409.
DR   GeneID; 7961234; -.
DR   KEGG; eic:NT01EI_0409; -.
DR   PATRIC; fig|634503.3.peg.369; -.
DR   eggNOG; ENOG4105KW8; Bacteria.
DR   eggNOG; COG1923; LUCA.
DR   HOGENOM; HOG000004931; -.
DR   KO; K03666; -.
DR   OrthoDB; POG091H05GW; -.
DR   Proteomes; UP000001485; Chromosome.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-HAMAP.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd01716; Hfq; 1.
DR   HAMAP; MF_00436; Hfq; 1.
DR   InterPro; IPR005001; Hfq.
DR   InterPro; IPR010920; LSM_dom.
DR   PANTHER; PTHR34772; PTHR34772; 1.
DR   Pfam; PF17209; Hfq; 1.
DR   SUPFAM; SSF50182; SSF50182; 1.
DR   TIGRFAMs; TIGR02383; Hfq; 1.
PE   3: Inferred from homology;
DR   PRODOM; C5BDN1.
DR   SWISS-2DPAGE; C5BDN1.
KW   Complete proteome {ECO:0000313|Proteomes:UP000001485};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001485};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_00436,
KW   ECO:0000256|SAAS:SAAS00767904};
KW   Stress response {ECO:0000256|HAMAP-Rule:MF_00436,
KW   ECO:0000256|SAAS:SAAS00767883}.
SQ   SEQUENCE   102 AA;  10903 MW;  530AA99425D6C542 CRC64;
     MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
     TVVPSRPVSH HSGNAGTGSA GSSYHHGGQA ASQPTQGSDD AE
//

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