(data stored in ACNUC7421 zone)

SWISSPROT: C6AZ72_RHILS

ID   C6AZ72_RHILS            Unreviewed;       179 AA.
AC   C6AZ72;
DT   01-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   01-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 55.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACS54398.1};
GN   OrderedLocusNames=Rleg_0087 {ECO:0000313|EMBL:ACS54398.1};
OS   Rhizobium leguminosarum bv. trifolii (strain WSM1325).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=395491 {ECO:0000313|EMBL:ACS54398.1, ECO:0000313|Proteomes:UP000002256};
RN   [1] {ECO:0000313|EMBL:ACS54398.1, ECO:0000313|Proteomes:UP000002256}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=WSM1325 {ECO:0000313|EMBL:ACS54398.1,
RC   ECO:0000313|Proteomes:UP000002256};
RX   PubMed=21304718;
RA   Reeve W., O'Hara G., Chain P., Ardley J., Brau L., Nandesena K.,
RA   Tiwari R., Copeland A., Nolan M., Han C., Brettin T., Land M.,
RA   Ovchinikova G., Ivanova N., Mavromatis K., Markowitz V., Kyrpides N.,
RA   Melino V., Denton M., Yates R., Howieson J.;
RT   "Complete genome sequence of Rhizobium leguminosarum bv. trifolii
RT   strain WSM1325, an effective microsymbiont of annual Mediterranean
RT   clovers.";
RL   Stand. Genomic Sci. 2:347-356(2010).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001622; ACS54398.1; -; Genomic_DNA.
DR   RefSeq; WP_012755827.1; NC_012850.1.
DR   ProteinModelPortal; C6AZ72; -.
DR   EnsemblBacteria; ACS54398; ACS54398; Rleg_0087.
DR   KEGG; rlg:Rleg_0087; -.
DR   HOGENOM; HOG000094755; -.
DR   KO; K03088; -.
DR   OMA; KGRFFTW; -.
DR   OrthoDB; POG091H05CM; -.
DR   BioCyc; RLEG395491:GHX2-87-MONOMER; -.
DR   Proteomes; UP000002256; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6AZ72.
DR   SWISS-2DPAGE; C6AZ72.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002256};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       24     91       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      121    173       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   179 AA;  20161 MW;  5658993671D6CE7E CRC64;
     MQGDDIADLI GRVALGDRRA FVALYNQTGP KLFSICLRIL KDRTEAEEAL QEAYISIWQR
     ARSFSVASGS SSAWLAAIAR NRSIDALRAR KPVADELDTV YDLADAGADP EMQTVTKDEG
     RRIDTCMEEL EADRAVAVKR AYVEGLSYQE LADQFGIPLN TMRTWLRRSL LKLRECMER
//

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