(data stored in ACNUC7421 zone)

SWISSPROT: C6W8S8_ACTMD

ID   C6W8S8_ACTMD            Unreviewed;       280 AA.
AC   C6W8S8;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   12-APR-2017, entry version 41.
DE   SubName: Full=Transposase IS4 family protein {ECO:0000313|EMBL:ACU37177.1};
GN   OrderedLocusNames=Amir_0183 {ECO:0000313|EMBL:ACU34154.1}, Amir_0583
GN   {ECO:0000313|EMBL:ACU34548.1}, Amir_3271
GN   {ECO:0000313|EMBL:ACU37177.1}, Amir_3659
GN   {ECO:0000313|EMBL:ACU37544.1}, Amir_6087
GN   {ECO:0000313|EMBL:ACU39894.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU37177.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU37177.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213}, and DSM 43827
RC   {ECO:0000313|EMBL:ACU37177.1};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34154.1; -; Genomic_DNA.
DR   EMBL; CP001630; ACU34548.1; -; Genomic_DNA.
DR   EMBL; CP001630; ACU37177.1; -; Genomic_DNA.
DR   EMBL; CP001630; ACU37544.1; -; Genomic_DNA.
DR   EMBL; CP001630; ACU39894.1; -; Genomic_DNA.
DR   STRING; 446462.Amir_6087; -.
DR   EnsemblBacteria; ACU34154; ACU34154; Amir_0183.
DR   EnsemblBacteria; ACU34548; ACU34548; Amir_0583.
DR   EnsemblBacteria; ACU37177; ACU37177; Amir_3271.
DR   EnsemblBacteria; ACU37544; ACU37544; Amir_3659.
DR   EnsemblBacteria; ACU39894; ACU39894; Amir_6087.
DR   KEGG; ami:Amir_0183; -.
DR   KEGG; ami:Amir_0583; -.
DR   KEGG; ami:Amir_3271; -.
DR   KEGG; ami:Amir_3659; -.
DR   KEGG; ami:Amir_6087; -.
DR   eggNOG; ENOG4108YVB; Bacteria.
DR   eggNOG; ENOG4111N01; LUCA.
DR   HOGENOM; HOG000013270; -.
DR   OMA; WRYVNET; -.
DR   OrthoDB; POG091H15ZC; -.
DR   Proteomes; UP000002213; Chromosome.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR027806; HARBI1_dom.
DR   InterPro; IPR027805; Transposase_HTH_dom.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF13359; DDE_Tnp_4; 1.
DR   Pfam; PF13613; HTH_Tnp_4; 1.
PE   4: Predicted;
DR   PRODOM; C6W8S8.
DR   SWISS-2DPAGE; C6W8S8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213}.
FT   DOMAIN       55    106       HTH_Tnp_4. {ECO:0000259|Pfam:PF13613}.
FT   DOMAIN      125    274       DDE Tnp4. {ECO:0000259|Pfam:PF13359}.
SQ   SEQUENCE   280 AA;  31133 MW;  3A3299D9C77826B9 CRC64;
     MAKPLVAELS TKKVLHRQGL HVLFYRAALP LSHQTLTFVS GLVRAHRKQL GSVWRKLNPG
     QQALLVLVYL RKGETFADLA AGFAVSTSTC WRYVNETVEL LAQRSPKLRE ALRKAKRQGM
     AHVVIDGTLI PIDRIAADRP FYSGKHKIHG VNLQVIASPD GTILWVSGDL PGSTHDTAAA
     RIWNILAALR HAGLIALGDK GYHAYDPTDR HVITPYKGRN KPESQKDANR AHARLRGPGE
     RANAQLKTWR ILRKLRCCPR RAGRLAKAIH VLQNYEATTG
//

If you have problems or comments...

PBIL Back to PBIL home page