(data stored in ACNUC7421 zone)

SWISSPROT: C6WF41_ACTMD

ID   C6WF41_ACTMD            Unreviewed;       115 AA.
AC   C6WF41;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   05-JUL-2017, entry version 54.
DE   RecName: Full=Nucleoid-associated protein Amir_0202 {ECO:0000256|HAMAP-Rule:MF_00274};
GN   OrderedLocusNames=Amir_0202 {ECO:0000313|EMBL:ACU34173.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34173.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34173.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -!- FUNCTION: Binds to DNA and alters its conformation. May be
CC       involved in regulation of gene expression, nucleoid organization
CC       and DNA protection. {ECO:0000256|HAMAP-Rule:MF_00274,
CC       ECO:0000256|SAAS:SAAS00385579}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000256|HAMAP-Rule:MF_00274,
CC       ECO:0000256|SAAS:SAAS00385564}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000256|HAMAP-
CC       Rule:MF_00274, ECO:0000256|SAAS:SAAS00831877}.
CC   -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000256|HAMAP-
CC       Rule:MF_00274, ECO:0000256|SAAS:SAAS00571631}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34173.1; -; Genomic_DNA.
DR   ProteinModelPortal; C6WF41; -.
DR   STRING; 446462.Amir_0202; -.
DR   EnsemblBacteria; ACU34173; ACU34173; Amir_0202.
DR   KEGG; ami:Amir_0202; -.
DR   eggNOG; ENOG4105KDX; Bacteria.
DR   eggNOG; COG0718; LUCA.
DR   HOGENOM; HOG000293240; -.
DR   KO; K09747; -.
DR   OMA; EMGKLTG; -.
DR   OrthoDB; POG091H00VL; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-HAMAP.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-HAMAP.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-HAMAP.
DR   Gene3D; 3.30.1310.10; -; 1.
DR   HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR   InterPro; IPR004401; YbaB/EbfC.
DR   Pfam; PF02575; YbaB_DNA_bd; 1.
DR   PIRSF; PIRSF004555; UCP004555; 1.
DR   SUPFAM; SSF82607; SSF82607; 1.
DR   TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6WF41.
DR   SWISS-2DPAGE; C6WF41.
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00274,
KW   ECO:0000256|SAAS:SAAS00831876};
KW   DNA-binding {ECO:0000256|HAMAP-Rule:MF_00274,
KW   ECO:0000256|SAAS:SAAS00090198};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213}.
FT   COILED        8     35       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   115 AA;  11741 MW;  DAEFF162DB87A5E8 CRC64;
     MQPGQPNMQQ ILQQAQMMQQ QLATAQQELT EAEVTGTAGG GLVRAVVTGG GELKSLAIDP
     RAVDPEDVET LSDLVVAAVR DANRAAQELA AQKMGPLASG MGGLDGLGGL GKLFG
//

If you have problems or comments...

PBIL Back to PBIL home page