(data stored in ACNUC7421 zone)

SWISSPROT: C6WHT9_ACTMD

ID   C6WHT9_ACTMD            Unreviewed;       184 AA.
AC   C6WHT9;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 57.
DE   SubName: Full=Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACU34390.1};
GN   OrderedLocusNames=Amir_0423 {ECO:0000313|EMBL:ACU34390.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34390.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34390.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001630; ACU34390.1; -; Genomic_DNA.
DR   RefSeq; WP_012783053.1; NC_013093.1.
DR   ProteinModelPortal; C6WHT9; -.
DR   STRING; 446462.Amir_0423; -.
DR   EnsemblBacteria; ACU34390; ACU34390; Amir_0423.
DR   KEGG; ami:Amir_0423; -.
DR   eggNOG; ENOG4108W1H; Bacteria.
DR   eggNOG; COG1309; LUCA.
DR   HOGENOM; HOG000161264; -.
DR   OMA; SWLRDCV; -.
DR   OrthoDB; POG091H07IF; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR001647; HTH_TetR.
DR   InterPro; IPR011075; Tet_transcr_reg_TetR-rel_C.
DR   Pfam; PF00440; TetR_N; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48498; SSF48498; 1.
DR   PROSITE; PS50977; HTH_TETR_2; 1.
PE   4: Predicted;
DR   PRODOM; C6WHT9.
DR   SWISS-2DPAGE; C6WHT9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335,
KW   ECO:0000256|SAAS:SAAS00786913};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transcription {ECO:0000256|SAAS:SAAS00131596};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00132066}.
FT   DOMAIN        6     65       HTH tetR-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS50977}.
FT   DNA_BIND     28     47       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00335}.
SQ   SEQUENCE   184 AA;  19763 MW;  8C19738A9EF825ED CRC64;
     MRADARKNRD HLLAIADAVI TEQGADVSMR DLARRAEVGL ATLLRHFPTR DALLDALLRA
     GFDELTTLAD RLEARLPPGE ALKAWLREFV ACAHTYRGAV TTMMGAIEDP DSALHASCVA
     MRGSGARLLE RAQAAGQART DLTGPDLFAL GGALIWLHDQ PTSAPRADHL LDVVAAAILT
     PEKP
//

If you have problems or comments...

PBIL Back to PBIL home page