(data stored in ACNUC7421 zone)

SWISSPROT: C6WHU9_ACTMD

ID   C6WHU9_ACTMD            Unreviewed;       174 AA.
AC   C6WHU9;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 50.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU34400.1};
GN   OrderedLocusNames=Amir_0433 {ECO:0000313|EMBL:ACU34400.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34400.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34400.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001630; ACU34400.1; -; Genomic_DNA.
DR   ProteinModelPortal; C6WHU9; -.
DR   STRING; 446462.Amir_0433; -.
DR   EnsemblBacteria; ACU34400; ACU34400; Amir_0433.
DR   KEGG; ami:Amir_0433; -.
DR   eggNOG; ENOG4105RCK; Bacteria.
DR   eggNOG; COG1595; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   OrthoDB; POG091H04ZH; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014325; RNA_pol_sigma-E_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02983; SigE-fam_strep; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6WHU9.
DR   SWISS-2DPAGE; C6WHU9.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       18     75       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      104    153       Sigma70_r4. {ECO:0000259|Pfam:PF04545}.
SQ   SEQUENCE   174 AA;  19477 MW;  2A57347529359649 CRC64;
     MDRQDFTRIA RERAVPWRRV AYLICGDWGR AEDLVQAALL RMYKHWHRIE PRGLEAYARK
     VISRLALDEA KRASRRKEVL GEVPDRPAAQ FDEEVDGAPE VRAALKAMPP RQRAVIVLRF
     YADLDVAATA KALGITQGTV KSQCSRGLDS LRAALGPHHA ALATRTPERT GGSR
//

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