(data stored in ACNUC7421 zone)

SWISSPROT: C6WHW0_ACTMD

ID   C6WHW0_ACTMD            Unreviewed;       201 AA.
AC   C6WHW0;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 52.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU34411.1};
GN   OrderedLocusNames=Amir_0444 {ECO:0000313|EMBL:ACU34411.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34411.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34411.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001630; ACU34411.1; -; Genomic_DNA.
DR   RefSeq; WP_012783074.1; NC_013093.1.
DR   ProteinModelPortal; C6WHW0; -.
DR   STRING; 446462.Amir_0444; -.
DR   EnsemblBacteria; ACU34411; ACU34411; Amir_0444.
DR   KEGG; ami:Amir_0444; -.
DR   eggNOG; ENOG4105S2C; Bacteria.
DR   eggNOG; ENOG4111XD3; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   OMA; TPLLWHT; -.
DR   OrthoDB; POG091H0DKQ; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C6WHW0.
DR   SWISS-2DPAGE; C6WHW0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       40    102       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
SQ   SEQUENCE   201 AA;  22454 MW;  0B00378F5A0C475C CRC64;
     MGELRMTGER PPWEGLDGTD RHEVCVIAAR SGDRRALDVL IHDLTPLVWH VARGHGLDRS
     TAEDVVQTVW LALLRNLGRI TQPRALAGWL VVATRREAQR TWTPSRRESS LSDEMAEQQE
     SHIGLPEDAA LVDDRDQRLW RAFGKLSQRC QELLRLTVLA GRAEYRAVAE ALSMPRGSIG
     PTRGRCLGTL RAHLEAEGGS R
//

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