(data stored in ACNUC7421 zone)

SWISSPROT: C6WJ98_ACTMD

ID   C6WJ98_ACTMD            Unreviewed;       584 AA.
AC   C6WJ98;
DT   22-SEP-2009, integrated into UniProtKB/TrEMBL.
DT   22-SEP-2009, sequence version 1.
DT   07-JUN-2017, entry version 58.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACU34530.1};
GN   OrderedLocusNames=Amir_0563 {ECO:0000313|EMBL:ACU34530.1};
OS   Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU
OS   3971).
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Actinosynnema.
OX   NCBI_TaxID=446462 {ECO:0000313|EMBL:ACU34530.1, ECO:0000313|Proteomes:UP000002213};
RN   [1] {ECO:0000313|EMBL:ACU34530.1, ECO:0000313|Proteomes:UP000002213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971
RC   {ECO:0000313|Proteomes:UP000002213};
RX   PubMed=21304636; DOI=10.4056/sigs.21137;
RA   Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Del Rio T.G.,
RA   Nolan M., Lucas S., Tice H., Cheng J.F., Chertkov O., Bruce D.,
RA   Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N.,
RA   Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.J.,
RA   Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P.,
RA   Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Actinosynnema mirum type strain (101).";
RL   Stand. Genomic Sci. 1:46-53(2009).
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DR   EMBL; CP001630; ACU34530.1; -; Genomic_DNA.
DR   STRING; 446462.Amir_0563; -.
DR   EnsemblBacteria; ACU34530; ACU34530; Amir_0563.
DR   KEGG; ami:Amir_0563; -.
DR   eggNOG; ENOG4105D03; Bacteria.
DR   eggNOG; COG0122; LUCA.
DR   eggNOG; COG2169; LUCA.
DR   OMA; TSHAGAN; -.
DR   OrthoDB; POG091H02W0; -.
DR   Proteomes; UP000002213; Chromosome.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.1670.10; -; 1.
DR   Gene3D; 3.30.310.20; -; 1.
DR   InterPro; IPR010316; AlkA_N.
DR   InterPro; IPR011257; DNA_glycosylase.
DR   InterPro; IPR009057; Homeobox-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR023170; HTH_base_excis_C.
DR   Pfam; PF06029; AlkA_N; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM01009; AlkA_N; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF48150; SSF48150; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
DR   PRODOM; C6WJ98.
DR   SWISS-2DPAGE; C6WJ98.
KW   Complete proteome {ECO:0000313|Proteomes:UP000002213};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00593,
KW   ECO:0000256|SAAS:SAAS00048696};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002213};
KW   Transcription {ECO:0000256|PROSITE-ProRule:PRU00593};
KW   Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00593}.
FT   DOMAIN      190    288       HTH araC/xylS-type DNA-binding.
FT                                {ECO:0000259|PROSITE:PS01124}.
FT   DNA_BIND    207    228       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
FT   DNA_BIND    255    278       H-T-H motif. {ECO:0000256|PROSITE-
FT                                ProRule:PRU00593}.
SQ   SEQUENCE   584 AA;  58912 MW;  7AF2F2552C5F789C CRC64;
     MGAHAPADRH TTTHPPATDR PPATTGRATR GGAPTADRAP IGSRIPTAGQ PAAASRVPAD
     ASAPTTSRAA TSHAGANAVA PAAGRTPVGR ASADAGGPTA GRGAAGRVPA AAGAPAASHA
     AASRASAGAG APAAGRAAPG PAPAEVGAPA TGHTTAPRPR APHPFADHPT APPTTDLVDP
     TWGPRSDPVA RALRMIVDGV VDREGVPGLA TRLGYSVRQV ERRLLAELGS GPLAIARARR
     ARTARLLAET TALPMTEIAV AAGFASVRAF NETVRELFGR SPTDLRGGRR APGGVPGAVV
     LRLPFRGPLH APSLFGPLVA NAVPGVEEWR DGAYRRTLRL PRGHGVVSLR PRADHVECDL
     TLTDSRDLPV AISRCRRALD LDADPAEVDG ALRADPALRP LVDAAPGTRV PGVVDGAECA
     VRALLGEGTG TGAAMGAGAN AGWAHRVVRE AGEAVPDPAG GGLTHLFPTP QALLDLDPAL
     LPPPARAPLT ALLTALVGGV DLGAGADRAE ARSALRCAGE RVLDAVLTRS LGDPDGFCPD
     DPAVRAAAGG IGLPVTAAAL ADRSRAWRPW RAYATRYLLG RAPT
//

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