(data stored in ACNUC7421 zone)

SWISSPROT: C7QJ92_CATAD

ID   C7QJ92_CATAD            Unreviewed;       203 AA.
AC   C7QJ92;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   07-JUN-2017, entry version 53.
DE   SubName: Full=RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU69234.1};
GN   OrderedLocusNames=Caci_0281 {ECO:0000313|EMBL:ACU69234.1};
OS   Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC
OS   102108 / JCM 14897).
OC   Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae;
OC   Catenulispora.
OX   NCBI_TaxID=479433 {ECO:0000313|EMBL:ACU69234.1, ECO:0000313|Proteomes:UP000000851};
RN   [1] {ECO:0000313|EMBL:ACU69234.1, ECO:0000313|Proteomes:UP000000851}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897
RC   {ECO:0000313|Proteomes:UP000000851};
RX   PubMed=21304647;
RA   Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S.,
RA   Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chain P., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z.,
RA   Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V.,
RA   Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Catenulispora acidiphila type strain (ID
RT   139908).";
RL   Stand. Genomic Sci. 1:119-125(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001700; ACU69234.1; -; Genomic_DNA.
DR   ProteinModelPortal; C7QJ92; -.
DR   STRING; 479433.Caci_0281; -.
DR   EnsemblBacteria; ACU69234; ACU69234; Caci_0281.
DR   KEGG; cai:Caci_0281; -.
DR   eggNOG; ENOG4108SGZ; Bacteria.
DR   eggNOG; ENOG4111INY; LUCA.
DR   HOGENOM; HOG000094755; -.
DR   OMA; MSWDAEF; -.
DR   OrthoDB; POG091H04ZH; -.
DR   Proteomes; UP000000851; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014325; RNA_pol_sigma-E_actinobac.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02983; SigE-fam_strep; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C7QJ92.
DR   SWISS-2DPAGE; C7QJ92.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000851};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000851};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       41    102       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      130    182       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   203 AA;  22520 MW;  BF0A93B6F7033140 CRC64;
     MRVTRESDQH GSEQYGTDET GSITGGSGDE EFGRLVVARS HALRRTAYLM CGDWFEAEDL
     VQQALIKLHA AWGRVQRHDD LDAYLRKTLL RTCIDEKRRA RWSKEHPASD AMPDTVEAPG
     EPDPETLSDR DELVAALREL PSGQRAVLIL RFWEDLSVEE TAQLLKCTAG TVKSQTSRGL
     GALREAFGVD RAGALLARTE GKA
//

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