(data stored in ACNUC7421 zone)

SWISSPROT: C7PXE8_CATAD

ID   C7PXE8_CATAD            Unreviewed;       431 AA.
AC   C7PXE8;
DT   13-OCT-2009, integrated into UniProtKB/TrEMBL.
DT   13-OCT-2009, sequence version 1.
DT   07-JUN-2017, entry version 55.
DE   SubName: Full=Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU69499.1};
GN   OrderedLocusNames=Caci_0562 {ECO:0000313|EMBL:ACU69499.1};
OS   Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC
OS   102108 / JCM 14897).
OC   Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae;
OC   Catenulispora.
OX   NCBI_TaxID=479433 {ECO:0000313|EMBL:ACU69499.1, ECO:0000313|Proteomes:UP000000851};
RN   [1] {ECO:0000313|EMBL:ACU69499.1, ECO:0000313|Proteomes:UP000000851}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897
RC   {ECO:0000313|Proteomes:UP000000851};
RX   PubMed=21304647;
RA   Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S.,
RA   Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S.,
RA   Mikhailova N., Pati A., Ivanova N., Mavromatis K., Chen A.,
RA   Palaniappan K., Chain P., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z.,
RA   Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V.,
RA   Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Catenulispora acidiphila type strain (ID
RT   139908).";
RL   Stand. Genomic Sci. 1:119-125(2009).
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|SAAS:SAAS00565917}.
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DR   EMBL; CP001700; ACU69499.1; -; Genomic_DNA.
DR   RefSeq; WP_012784794.1; NC_013131.1.
DR   STRING; 479433.Caci_0562; -.
DR   EnsemblBacteria; ACU69499; ACU69499; Caci_0562.
DR   KEGG; cai:Caci_0562; -.
DR   eggNOG; ENOG4105CHP; Bacteria.
DR   eggNOG; COG4941; LUCA.
DR   HOGENOM; HOG000152991; -.
DR   OMA; AHAFLIS; -.
DR   OrthoDB; POG091H08O2; -.
DR   Proteomes; UP000000851; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription, initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 1.25.40.10; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR   InterPro; IPR011990; TPR-like_helical_dom.
DR   InterPro; IPR011991; WHTH_DNA-bd_dom.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88659; SSF88659; 1.
DR   SUPFAM; SSF88946; SSF88946; 1.
DR   TIGRFAMs; TIGR02937; sigma70-ECF; 1.
PE   3: Inferred from homology;
DR   PRODOM; C7PXE8.
DR   SWISS-2DPAGE; C7PXE8.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000851};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00611263};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000851};
KW   Sigma factor {ECO:0000256|SAAS:SAAS00611278};
KW   Transcription {ECO:0000256|SAAS:SAAS00611290};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00611294}.
FT   DOMAIN       22     80       Sigma70_r2. {ECO:0000259|Pfam:PF04542}.
FT   DOMAIN      128    179       Sigma70_r4_2. {ECO:0000259|Pfam:PF08281}.
SQ   SEQUENCE   431 AA;  47826 MW;  434B6745023C506D CRC64;
     MTDADDVARA VADAHRREWA FVLAATVRVA QDFDLAEECV QEAYAAALSA WRRDGVPAKP
     AAWLTTTAKR RAMDAIRRER TLRSKLPLLI ELEGREGQED QEAREGQQHH QDQADPEATV
     PDERLRLIFT CCHPALAQEA QLALTLRLVC GLSTPDTARM LLVSESTMAA RITRAKKKIS
     AARIPFRVPR AAELPDRLGA VLGVVHLLFT AGHTAPSGPD LLRTELTDRA LFLARTLRDL
     MPDEPEVRGL LALFLVTDTR RATRTDADGR LLRLEEQDRS QWDGEALAEA HELIVAGLRG
     GRAGRYLLQA AIASLYAQAP TYEETDWSQL VVLYDRLLAV WPSPTVALNR TVPLSMAQGP
     EKAFDAVAEL EKDDRLARYP YLPAIKADLW RRLGRDAEAT KAYRQALELT DNEAERAFLA
     GRAGETGPPV R
//

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