(data stored in ACNUC7421 zone)

SWISSPROT: D1CEE0_THET1

ID   D1CEE0_THET1            Unreviewed;       477 AA.
AC   D1CEE0;
DT   19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT   19-JAN-2010, sequence version 1.
DT   16-JAN-2019, entry version 51.
DE   RecName: Full=RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113};
DE            EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};
GN   Name=rtcB {ECO:0000256|RuleBase:RU371113};
GN   OrderedLocusNames=Tter_0374 {ECO:0000313|EMBL:ACZ41296.1};
OS   Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).
OC   Bacteria; Thermobaculum.
OX   NCBI_TaxID=525904 {ECO:0000313|EMBL:ACZ41296.1, ECO:0000313|Proteomes:UP000000323};
RN   [1] {ECO:0000313|EMBL:ACZ41296.1, ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   PubMed=21304745;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Del Rio T.G., Nolan M.,
RA   Tice H., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N.,
RA   Mavromatis K., Ovchinnikova G., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Lu M., Brettin T.,
RA   Detter J.C., Goker M., Tindall B.J., Beck B., McDermott T.R.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P., Cheng J.F.;
RT   "Complete genome sequence of 'Thermobaculum terrenum' type strain
RT   (YNP1).";
RL   Stand. Genomic Sci. 3:153-162(2010).
RN   [2] {ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   DOI=10.4056/sigs.1153107;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Glavina Del Rio T.,
RA   Nolan M., Tice H., Han C., Goodwin L., Pitluck S., Liolios K.,
RA   Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Chen A.,
RA   Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Lu M.,
RA   Brettin T., Detter J., Goker M., Tindall B., Beck B., McDermott T.,
RA   Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P.,
RA   Kyrpides N., Klenk H., Cheng J.;
RT   "Complete genome sequence of Thermobaculum terrenum type strain
RT   (YNP1T).";
RL   Stand. Genomic Sci. 3:153-162(2010).
CC   -!- COFACTOR:
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000256|RuleBase:RU371113};
CC       Note=Binds 2 manganese ions per subunit.
CC       {ECO:0000256|RuleBase:RU371113};
CC   -!- SUBUNIT: Monomer. {ECO:0000256|RuleBase:RU371113}.
CC   -!- SIMILARITY: Belongs to the RtcB family.
CC       {ECO:0000256|RuleBase:RU371113}.
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DR   EMBL; CP001825; ACZ41296.1; -; Genomic_DNA.
DR   RefSeq; WP_012874331.1; NC_013525.1.
DR   STRING; 525904.Tter_0374; -.
DR   EnsemblBacteria; ACZ41296; ACZ41296; Tter_0374.
DR   KEGG; ttr:Tter_0374; -.
DR   eggNOG; ENOG4105E0Y; Bacteria.
DR   eggNOG; COG1690; LUCA.
DR   HOGENOM; HOG000220065; -.
DR   KO; K14415; -.
DR   OMA; YDVAHNV; -.
DR   OrthoDB; 1384936at2; -.
DR   BioCyc; TTER525904:G1GGS-378-MONOMER; -.
DR   Proteomes; UP000000323; Chromosome 1.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008452; F:RNA ligase activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 3.90.1860.10; -; 1.
DR   InterPro; IPR001233; RtcB.
DR   InterPro; IPR036025; RtcB-like_sf.
DR   PANTHER; PTHR11118; PTHR11118; 1.
DR   Pfam; PF01139; RtcB; 1.
DR   SUPFAM; SSF103365; SSF103365; 1.
DR   PROSITE; PS01288; UPF0027; 1.
PE   3: Inferred from homology;
DR   PRODOM; D1CEE0.
DR   SWISS-2DPAGE; D1CEE0.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000323};
KW   Ligase {ECO:0000256|RuleBase:RU371113};
KW   Manganese {ECO:0000256|RuleBase:RU371113};
KW   Metal-binding {ECO:0000256|RuleBase:RU371113};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000323}.
SQ   SEQUENCE   477 AA;  52088 MW;  DE15BD8436C439FD CRC64;
     MDLSKLEKID EYTWTVPLKP GEKRAPVVLY GTKELLRSMD DKVLEQITNV AKLPGIVGKA
     MTMPDAHWGY GFPIGGVAAF DPEEGGIISA GGVGFDISCG IRCLRTDLSL RDLEPYAERL
     ADELYKTIPA GVGEEGEIKL SPKELDRVLE GGAEWAVREG YGVPEDLEYI EEHGRMEGAV
     PEFVSKEAKK RQKGEMGTLG SGNHYLEVQV VEKVYDQKAA EAFGLWEGQI VVSIHCGSRG
     LGHQIGTDYL LSLAKAAQRL KIDLPDRELA CAPITSPEGH EYIGAMNAGI NCALANRQIL
     THLTRQAFRK IIPGTKVETL YDVSHNTCKR EKHVIDGRER FVYIHRKGAT RAYGPGHPDI
     PQRYRNIGQP VLIGGSMGTG SYILVGVDTS EQRALSTASH GAGRALSRRQ ALKQWSGKEI
     IQQLAARGII VRAHSSRGVA EEAPDAYKNV DLVAEATEYA GLANRVALLR PKICVKG
//

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