(data stored in ACNUC7421 zone)

SWISSPROT: D1CEW2_THET1

ID   D1CEW2_THET1            Unreviewed;       224 AA.
AC   D1CEW2;
DT   19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT   19-JAN-2010, sequence version 1.
DT   08-MAY-2019, entry version 65.
DE   SubName: Full=Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACZ41468.1};
GN   OrderedLocusNames=Tter_0550 {ECO:0000313|EMBL:ACZ41468.1};
OS   Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).
OC   Bacteria; Thermobaculum.
OX   NCBI_TaxID=525904 {ECO:0000313|EMBL:ACZ41468.1, ECO:0000313|Proteomes:UP000000323};
RN   [1] {ECO:0000313|EMBL:ACZ41468.1, ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   PubMed=21304745;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Del Rio T.G., Nolan M.,
RA   Tice H., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N.,
RA   Mavromatis K., Ovchinnikova G., Pati A., Chen A., Palaniappan K.,
RA   Land M., Hauser L., Chang Y.J., Jeffries C.D., Lu M., Brettin T.,
RA   Detter J.C., Goker M., Tindall B.J., Beck B., McDermott T.R.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P., Cheng J.F.;
RT   "Complete genome sequence of 'Thermobaculum terrenum' type strain
RT   (YNP1).";
RL   Stand. Genomic Sci. 3:153-162(2010).
RN   [2] {ECO:0000313|Proteomes:UP000000323}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-798 / YNP1 {ECO:0000313|Proteomes:UP000000323};
RX   DOI=10.4056/sigs.1153107;
RA   Kiss H., Cleland D., Lapidus A., Lucas S., Glavina Del Rio T.,
RA   Nolan M., Tice H., Han C., Goodwin L., Pitluck S., Liolios K.,
RA   Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Chen A.,
RA   Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Lu M.,
RA   Brettin T., Detter J., Goker M., Tindall B., Beck B., McDermott T.,
RA   Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P.,
RA   Kyrpides N., Klenk H., Cheng J.;
RT   "Complete genome sequence of Thermobaculum terrenum type strain
RT   (YNP1T).";
RL   Stand. Genomic Sci. 3:153-162(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001825; ACZ41468.1; -; Genomic_DNA.
DR   STRING; 525904.Tter_0550; -.
DR   EnsemblBacteria; ACZ41468; ACZ41468; Tter_0550.
DR   KEGG; ttr:Tter_0550; -.
DR   eggNOG; ENOG4108RBZ; Bacteria.
DR   eggNOG; COG0664; LUCA.
DR   OMA; KPASICC; -.
DR   BioCyc; TTER525904:G1GGS-554-MONOMER; -.
DR   Proteomes; UP000000323; Chromosome 1.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR   CDD; cd00038; CAP_ED; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR012318; HTH_CRP.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF00027; cNMP_binding; 1.
DR   Pfam; PF13545; HTH_Crp_2; 1.
DR   SMART; SM00100; cNMP; 1.
DR   SMART; SM00419; HTH_CRP; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
DR   PROSITE; PS51063; HTH_CRP_2; 1.
PE   4: Predicted;
DR   PRODOM; D1CEW2.
DR   SWISS-2DPAGE; D1CEW2.
KW   Complete proteome {ECO:0000313|Proteomes:UP000000323};
KW   DNA-binding {ECO:0000256|SAAS:SAAS00989980};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000323};
KW   Transcription {ECO:0000256|SAAS:SAAS00990022};
KW   Transcription regulation {ECO:0000256|SAAS:SAAS00990035}.
FT   DOMAIN       11     80       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
FT   DOMAIN      146    214       HTH crp-type. {ECO:0000259|PROSITE:
FT                                PS51063}.
SQ   SEQUENCE   224 AA;  25264 MW;  5905FA3B1A72C829 CRC64;
     MDKSILHQLY PFSGMPQDLL RTLVNMTSYR LYAQGQLIID LQEGRDRTLI LVSGLARVYR
     ISTQGKELTL AKFVTGDILG LAPNDPILQP SNLLEAIADG TGICRVPREH FQQIIISDPE
     IASYCFCQLS ERLGKAYDLI EEVVFMDVCT RLARTLSRLA KANEQRLVTA THQELAGMIG
     TSQEEVTRKL RHLRELGLIN YQPHHRGIVV PNPDRLLSEL NDLT
//

If you have problems or comments...

PBIL Back to PBIL home page