(data stored in SCRATCH3701 zone)

SWISSPROT: D5E966_METMS

ID   D5E966_METMS            Unreviewed;       213 AA.
AC   D5E966;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 55.
DE   RecName: Full=50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318};
GN   Name=rpl1 {ECO:0000256|HAMAP-Rule:MF_01318};
GN   OrderedLocusNames=Mmah_0182 {ECO:0000313|EMBL:ADE35717.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE35717.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE35717.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds directly to 23S rRNA. Probably involved in E site tRNA
CC       release. {ECO:0000256|HAMAP-Rule:MF_01318}.
CC   -!- FUNCTION: Protein L1 is also a translational repressor protein, it
CC       controls the translation of its operon by binding to its mRNA.
CC       {ECO:0000256|HAMAP-Rule:MF_01318}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC       Rule:MF_01318, ECO:0000256|SAAS:SAAS00724838}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL1 family.
CC       {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|RuleBase:RU000659,
CC       ECO:0000256|SAAS:SAAS00804841}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001994; ADE35717.1; -; Genomic_DNA.
DR   RefSeq; WP_013036660.1; NC_014002.1.
DR   EnsemblBacteria; ADE35717; ADE35717; Mmah_0182.
DR   GeneID; 8982313; -.
DR   KEGG; mmh:Mmah_0182; -.
DR   eggNOG; arCOG04289; Archaea.
DR   eggNOG; COG0081; LUCA.
DR   HOGENOM; HOG000207016; -.
DR   KO; K02863; -.
DR   OMA; GWTDVDV; -.
DR   OrthoDB; 70269at2157; -.
DR   BioCyc; MMAH547558:G1GHT-182-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00403; Ribosomal_L1; 1.
DR   Gene3D; 3.40.50.790; -; 1.
DR   HAMAP; MF_01318_A; Ribosomal_L1_A; 1.
DR   InterPro; IPR002143; Ribosomal_L1.
DR   InterPro; IPR023674; Ribosomal_L1-like.
DR   InterPro; IPR028364; Ribosomal_L1/biogenesis.
DR   InterPro; IPR016095; Ribosomal_L1_3-a/b-sand.
DR   InterPro; IPR023669; Ribosomal_L1_arc.
DR   InterPro; IPR023673; Ribosomal_L1_CS.
DR   Pfam; PF00687; Ribosomal_L1; 1.
DR   PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR   SUPFAM; SSF56808; SSF56808; 1.
DR   PROSITE; PS01199; RIBOSOMAL_L1; 1.
PE   3: Inferred from homology;
DR   PRODOM; D5E966.
DR   SWISS-2DPAGE; D5E966.
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059};
KW   Repressor {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00724828};
KW   Ribonucleoprotein {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|RuleBase:RU000659, ECO:0000256|SAAS:SAAS00724834};
KW   Ribosomal protein {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|RuleBase:RU000659, ECO:0000256|SAAS:SAAS00724841,
KW   ECO:0000313|EMBL:ADE35717.1};
KW   RNA-binding {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|SAAS:SAAS00724832};
KW   rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|SAAS:SAAS00724840};
KW   Translation regulation {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|SAAS:SAAS00724842};
KW   tRNA-binding {ECO:0000256|HAMAP-Rule:MF_01318,
KW   ECO:0000256|SAAS:SAAS00724847}.
SQ   SEQUENCE   213 AA;  23868 MW;  0338FF5A4B92F513 CRC64;
     MVEESILNTV ERLFEESPQR NFAESVDLAI NLKNLDMSQP KYRVDEEIYL PNGLGKDLKI
     AVFAKGEVGL QAKEAGCDYV FTEEDINDLA DDKSRARSIA NECDFFIAEV QYMPLIGKTL
     GAILGPRGKM PVPLTPDKNV ADMIRSSKNS IRIRSKDKLT FHVAVGRRDM DAERIAENIE
     SIVNRVESVL DKGKQNLKSI YVTTTMGKSL RVI
//

If you have problems or comments...

PBIL Back to PBIL home page