(data stored in SCRATCH3701 zone)

SWISSPROT: D5E9C5_METMS

ID   D5E9C5_METMS            Unreviewed;       275 AA.
AC   D5E9C5;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 43.
DE   SubName: Full=Endonuclease IV {ECO:0000313|EMBL:ADE35776.1};
DE            EC=3.1.21.- {ECO:0000313|EMBL:ADE35776.1};
GN   OrderedLocusNames=Mmah_0243 {ECO:0000313|EMBL:ADE35776.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE35776.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE35776.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001994; ADE35776.1; -; Genomic_DNA.
DR   RefSeq; WP_013036719.1; NC_014002.1.
DR   EnsemblBacteria; ADE35776; ADE35776; Mmah_0243.
DR   GeneID; 8982375; -.
DR   KEGG; mmh:Mmah_0243; -.
DR   eggNOG; arCOG01894; Archaea.
DR   eggNOG; COG0648; LUCA.
DR   HOGENOM; HOG000058486; -.
DR   KO; K01151; -.
DR   OMA; HIHISGI; -.
DR   OrthoDB; 51470at2157; -.
DR   BioCyc; MMAH547558:G1GHT-241-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR001719; AP_endonuc_2.
DR   InterPro; IPR036237; Xyl_isomerase-like_sf.
DR   InterPro; IPR013022; Xyl_isomerase-like_TIM-brl.
DR   PANTHER; PTHR21445; PTHR21445; 1.
DR   Pfam; PF01261; AP_endonuc_2; 1.
DR   SMART; SM00518; AP2Ec; 1.
DR   SUPFAM; SSF51658; SSF51658; 1.
PE   4: Predicted;
DR   PRODOM; D5E9C5.
DR   SWISS-2DPAGE; D5E9C5.
KW   Endonuclease {ECO:0000313|EMBL:ADE35776.1};
KW   Hydrolase {ECO:0000313|EMBL:ADE35776.1};
KW   Nuclease {ECO:0000313|EMBL:ADE35776.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059}.
FT   DOMAIN          24..235
FT                   /note="AP_endonuc_2"
FT                   /evidence="ECO:0000259|Pfam:PF01261"
SQ   SEQUENCE   275 AA;  30365 MW;  D869985F55E32BD9 CRC64;
     MSLLFGTAGT PLSAKGRGSE GGVRRVKELG LGCMELEFVR GVRMKEPTAE KIADTARKTG
     ISLSVHAPYY INLNSKEEEK IQASIKRIYD SAYIGNICGA GSIVFHPAYY HEQNGNTVFS
     KVESLLEELA GQLEDEGINA TLRPETTGKP SQFGNLEETL ALSASIEGVM PCIDFAHLHA
     RSKGEENSYA EFSAVLEKVE EYLGKEGLRN MHMHISGIEY TDKGEKNHLV LEESDLNFSE
     LMQALKDFRA QGLVICESPN LEQDALLLQK TYENK
//

If you have problems or comments...

PBIL Back to PBIL home page