(data stored in SCRATCH3701 zone)

SWISSPROT: D5E9E1_METMS

ID   D5E9E1_METMS            Unreviewed;       405 AA.
AC   D5E9E1;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   11-DEC-2019, entry version 41.
DE   RecName: Full=DNA repair protein {ECO:0000256|HAMAP-Rule:MF_02096};
GN   OrderedLocusNames=Mmah_0260 {ECO:0000313|EMBL:ADE35792.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE35792.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE35792.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Involved in DNA damage repair. {ECO:0000256|HAMAP-
CC       Rule:MF_02096}.
CC   -!- DOMAIN: Contains a predicted C4 metal binding domain at the N-terminus,
CC       which could be a zinc finger DNA binding domain. {ECO:0000256|HAMAP-
CC       Rule:MF_02096}.
CC   -!- SIMILARITY: Belongs to the Nre family. {ECO:0000256|HAMAP-
CC       Rule:MF_02096}.
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DR   EMBL; CP001994; ADE35792.1; -; Genomic_DNA.
DR   RefSeq; WP_013036735.1; NC_014002.1.
DR   EnsemblBacteria; ADE35792; ADE35792; Mmah_0260.
DR   GeneID; 8982392; -.
DR   KEGG; mmh:Mmah_0260; -.
DR   eggNOG; arCOG04269; Archaea.
DR   eggNOG; COG1602; LUCA.
DR   HOGENOM; HOG000223838; -.
DR   KO; K22585; -.
DR   OMA; YAPVGVW; -.
DR   OrthoDB; 17407at2157; -.
DR   BioCyc; MMAH547558:G1GHT-257-MONOMER; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_02096; Nre; 1.
DR   InterPro; IPR033167; Nre.
DR   InterPro; IPR006979; Nre_C.
DR   InterPro; IPR006978; Nre_N.
DR   PANTHER; PTHR38136; PTHR38136; 1.
DR   Pfam; PF04895; Nre_C; 1.
DR   Pfam; PF04894; Nre_N; 1.
PE   3: Inferred from homology;
DR   PRODOM; D5E9E1.
DR   SWISS-2DPAGE; D5E9E1.
KW   DNA damage {ECO:0000256|HAMAP-Rule:MF_02096};
KW   DNA repair {ECO:0000256|HAMAP-Rule:MF_02096};
KW   Metal-binding {ECO:0000256|HAMAP-Rule:MF_02096};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059};
KW   Zinc {ECO:0000256|HAMAP-Rule:MF_02096};
KW   Zinc-finger {ECO:0000256|HAMAP-Rule:MF_02096}.
FT   DOMAIN          13..283
FT                   /note="Nre_N"
FT                   /evidence="ECO:0000259|Pfam:PF04894"
FT   DOMAIN          294..403
FT                   /note="Nre_C"
FT                   /evidence="ECO:0000259|Pfam:PF04895"
FT   ZN_FING         5..19
FT                   /note="C4-type"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_02096"
SQ   SEQUENCE   405 AA;  45468 MW;  66B48FD4D21A1BA7 CRC64;
     MKTQCIECKG KGLCGRTRCP ILEKFRATAK YSPQKQGGKT IFGASPPAIF VGRYGYPEIS
     AGPMIPPLLE SDEAAKLEDP HALLGMGIDD IIQKRCQLVR ANTTVKVKQF EKGRLIEKAQ
     EMALSRKPVD TEVLLSKPLK PAQKFDGVLT PMGPAGKMER FEISENPKVP DKVDYLTYDN
     DVKATDAALE LYGHNIGCEH ITRLLSIGLL GQERKLVPTR WAITATDDMV GKELTKDLLD
     YPEIKDIQLY SGGSLGNHFE ILLIPRSYSF ELLELWMART VWSADKAWIG QDMEGTSGKK
     GYSPLAGGYY AARLPVLEKL KSIRKQAAVF AIREITPDYW APLGVWVVRE AARNALSTEP
     YSFETLEEAL MNMKTRINTP FYQWRDKSKL LPYVKEQTTL SRFLP
//

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